Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00216 ATGGCGCAACTTCAAGTCCAAGCATTTGAGTCATTCAAGTTGCATTCATGCAAACTCATTCACATGGCCTCCTTCTCTCACCCTTCAACCTTGAGCCTCAACTGGAAAAAATCTCTTATATTGCCTCGTCTTTCTGATTCCCGAACATTCCCAGAACCTGACAAAACAGCAATTTTTTATCGCTCATCAATGGTTCGATGTCGCACTGTATGCAAGATGAAAGGATCAGATATGATGTCGCAACTGGAAATTGGGAAACCGGAGGAAAAGAGGAAACCAGAGAAACAAGCCAATGGGATATTCTGGATCATACTTCTTAATATTGGAATATACGTGGCAGATCATTTTTTTCAGGTTCGGGGCATCAAAGGTCTGTACCTATACCATGGCTGGCCTGTTTGGTACCAGTTTCTGACAGCAACATTTTGTCATGCTGATTGGAAGCATCTTTCGAGcaaccttttcttcttgtacaTTTTTGGAAAGCTTgttgaagaagaggaaggaaaCTTTGGTTTGTGGCTTTGTTACATTCTTACTGGTGTCGGAGCAAACCTTGTTTCGTGGTTAGTTCTTCCAAGAAATTCAGTTTCTGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTCACCATCAGTGTCCTTGTAAAGATGTCCTGGGATTGGAGGAAGATCCTCGAGGTGCTTATATTGGGTCAGTTTGTCATCGAGAGGGTTATGGAAGCAGCCCAAGCTTCAACAACATTATCAGGCACCATTCGTGGAGGCTACTTACAAAATGTCAACCATATTGCACATCTTTCTGGTGCTCTTGTCGGTGTGCTTTTGGTCTGGCTTCTTAGCAAAGTTTCTTCTGATCCTTCAGAATG 866 0.4111 MAQLQVQAFESFKLHSCKLIHMASFSHPSTLSLNWKKSLILPRLSDSRTFPEPDKTAIFYRSSMVRCRTVCKMKGSDMMSQLEIGKPEEKRKPEKQANGIFWIILLNIGIYVADHFFQVRGIKGLYLYHGWPVWYQFLTATFCHADWKHLSSNLFFLYIFGKLVEEEEGNFGLWLCYILTGVGANLVSWLVLPRNSVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASTTLSGTIRGGYLQNVNHIAHLSGALVGVLLVWLLSKVSSDPSE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00216 288 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 28 285 - -
Bva10g00216 288 Gene3D - 93 285 IPR035952 -
Bva10g00216 288 PANTHER RHOMBOID-RELATED PROTEIN 28 285 - -
Bva10g00216 288 Pfam Rhomboid family 134 281 IPR022764 GO:0004252|GO:0016021
Bva10g00216 288 SUPERFAMILY Rhomboid-like 98 282 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00216 Bva-Chr10 3397217 3399721 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00216 - - adu:107495220 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00216 10 3397217 3399721 Bva10g00216 10 3397217 3399721 ECH