Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00207 ATGGCTACCCCCGACTACGAAGATGCTCGTGCTGGCTACGATGACCCAGCCATGGCTCACCGCCAGCCACAAGCACAATATCAAGACCAGGGTTATGATCCGAATTTTGTACCCGATTCTGTGAAGATGTTCGTTGGGCACCTTTACCGCCACATCCGAGAGAAGAACGTGTACGAGATCCACCAGATGTACGAGAATTCATTCCAGACCTTGTCGGACCGTTACTTCAAGGACACTCCTTGGCCCTCTGTGGATGCCGTGGCTCACTATGTCGACAATGACCATGTCTTTTGCCTCCTTTACCGAGAGATGTGGTTTCGCCACCTCTACGCTAGACTCACCCCAACGCTCAAGCAGAGGATAGATTCCTGGGACAATTATTGTAGCCTCTTTCAGGTTGTGTTGCATGGAGTTGTCAATATGCAGCTCCCTAACCAGTGGTTGTGGGACATGGTGGATGAGTTTGTTTACCAGTTCCAGAGCTTCTGTCAGTATAGAGCCAAGATGAAGAACAAAACTGAAAATGAGATTGCACTCTTGAAGCAGTATGATCAGGCTTGGAACGTGTATGGTGTCCTCAACTTCTTACAAGCTCTTGTTGAGAAGTCCATGATTATTCAAATTCTGGAAAACGAGAAGGAAGGCCTAGAACAGTTTACTGCTACTGATGGTTATGATTACAATGGAGGAAGTAATGTCTTGAAGGTTCTGGGCTATTTCAGCATGGTTGGGTTACTGCGAGTTCATTGTCTCTTAGGTGATTATCATACTGGTCTGAAGTGCCTGCTTCCTATTGACATCAGTCAACAAGGCGTTTACACCAGTGTTATTGGAAGCCACATTACCACCATATATCATTATGGCTTTGCCAATCTTATGTTGCGCAGATATGTTGAAGCAATTCGGGAATTCAATAAAATCCTCTTGTACATCTATAAGACTAAGCAATATCATCAGAAATCTCCCCAGTATGAACAGATACTAAAGAAGAATGAGCAAATGTATGCCTTGTTGGCTATCTGCCTTTCCCTTTGCCCACAAAACGGGCTTGTCGATGAAATGGTGAACACCCAGTTGCGGGAGAAGTATGGTGAAAAGATGGTTAGAATGCAAAGATACGACGATGAGGCATTTGCTATCTATGATGAGCTCTTCTCATATGCTTGTCCCAAGTTCATTACCCCGTCAGCGCCTAGTTTTGAGGAGCCTTTAGTAAACTACAACCAGgaTGCTTATAGACTTCAGTTGAAACTGTTCCTTTATGAAGTGAAGCAGCAACAGTTGTTATCTGGTGTCCGGACCTTCTTGAAAGTGTATTCAACCATCTCTCTTGCAAAACTTGCGAGCTATATGGAAGTGGATGAAGCCACATTAAGGACTATATTGATGACATACAAGCATAAGACGCATGCTGTTGATAGTGAtggaaaaattatatgcaatGCTGATGTGGATTTCTACATTGATGATGACATTCTTCATGTTATAGAGTCGAAGCCCGCCAAACGTTATGGGGATTACTTCTTGCGTCAGATTGTCAAGCTTGAAGGGGTGATCAACGAGATGGATGGGGTAAAGCTGGAATG 1586 0.4382 MATPDYEDARAGYDDPAMAHRQPQAQYQDQGYDPNFVPDSVKMFVGHLYRHIREKNVYEIHQMYENSFQTLSDRYFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTENEIALLKQYDQAWNVYGVLNFLQALVEKSMIIQILENEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQNGLVDEMVNTQLREKYGEKMVRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEATLRTILMTYKHKTHAVDSDGKIICNADVDFYIDDDILHVIESKPAKRYGDYFLRQIVKLEGVINEMDGVKLE 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00207 528 Pfam RNA polymerase I-associated factor PAF67 119 514 IPR019382 GO:0003743|GO:0005737|GO:0005852
Bva10g00207 528 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 32 527 - -
Bva10g00207 528 MobiDBLite consensus disorder prediction 1 20 - -
Bva10g00207 528 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 21 517 IPR019382 GO:0003743|GO:0005737|GO:0005852
Bva10g00207 528 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 32 527 IPR019382 GO:0003743|GO:0005737|GO:0005852
Bva10g00207 528 ProSiteProfiles PCI domain profile. 303 502 IPR000717 -
Bva10g00207 528 Coils Coil 519 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00207 Bva-Chr10 3348157 3351739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00207 K15029 - gmx:100786533 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00207 10 3348157 3351739 Bva10g00207 10 3348157 3351739 ECH