Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00196 ATGGCCATGGCGATTAGGGCTTTTCTCATGTTCGTATTATTTCTGTTTTCTACTCAATTCTGCTTTTCGCTATATGAAGATCAAGTTGGCCTCATGGATTGGCACCAACAGTACCTTGGGAAAGTAAAACATGCTGTATTCCATACTCAGAAGACAGGACGGAAGCGTGTTCTAGTGTCTACCGAAGAAAATGTGGTTGCTTCACTTGATCTCCGTCATGGAGAGATTTTTTGGAGGCAAATTCTTGGAACCAACGACATTGTTGATGGACTTGACATTGCCCTGGGAAAATATGTCATTACTCTTTCCTCGGATGGAAGCATGCTGAGAGCATGGAACCTTCCTGATGGACAGATGGTTTGGGAGTCTTCCCTTCAAGGCTCGAAGTTGTCGAAGTCAATATTAAATGTTCCAAAAAATCTGAAAGCTGATAAGGATGATTTGATCCTTGTTTTTGGTCAAGGATGTCTCCATGCTGTTTCCAGCATTGATGGCGAGGTTCTCTGGAAGAAAGATTTTTCAGGTCAAAGCATTGAGGTTCAGCAGATTACTCATTCTCCCCATAATGATTTAATCTATGTAGCTGGTTATGTTGGTTCTTCCAAGTTCTATGTGTATCAAATCAATGCTAAGAATGGAGAGTTATTAAAGGACAATACTGCAGCACTTCCCTCTGGTACTTATGGGGAATTATTATCAGTCTCAAGTGATATGTTTGTGACATTGGATGATACGAGGTCAAAGATATTATTGATAAACCTCAAGAATGGAGAGATTAACTACAACGACAATCATATTTCAGACCTGATCAAGGATACATCTGGACAGGGAGTGATATTACCCTCAAGACTTCCGGGGATATTTGCTTTAAATCTTGATTCCCttggtattttaattaaagtgaCAAATGAAGGTGGGTTGGTGCTGGTCGAAAAGATCAATAATGCAGCAGCTCTAAGTGATGCTGTGTCAATTTCAGACGGCCAACATGCTTTTGCATTTGTCCAACatgaggaaaataaaattcaccTCACTGTAAAGGATGTTCACAACTGGAATAGTGACTTGCTTAAGGAAAGAATAGTAATAGACCATCAAAGAGGGAATgttgaaaagatttttataaacaattatgtCAGGACTGACAGGTCCAATGGCTTTAGAGCATTGATAGCAATGGAGGATCATTCTCTCTTATTGGTTCAACAGGGAGAGATTGTCTGGAGTAGAGAAGATGGTCTTGCCTCAGTTGTTGATGTAACAACATCAGACCTGCCTGTGGAAAAGGAAGGTGTATCTGTGGCAAAAGTGGAGCAGAATCTATTTGAATGGCTTAAGggACATATACTAAAGCTCAAAGGAACTTTGATGATTGCAAGCCCTGGGGATGTAGCAGCTATTCAAGCAATGAGGTTGAGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAATGGTTTCCGCAAATTGCTTATAGTACTTACCAGGGCAGGAAAAGTTTTTGCCTTGCACACTGGAGATGGACGTATAGTTTGGTCTGTGCTACTACGCACCCTAAGGAAATCAGAAGCATGTGAACGTCCAATTGGGCTTAACATTTACCAGTGGCAGGATCCACATCATCATGCATTGGATGAGAATCCATCTGTCTTTGTAGTTGGGCGATGTGGACCAAGTTTGGCTGCACCAgctgttctttcttttattgatgCATACACAGGGAGGGAACTCAATTCCTTGAGTCTTGCTCATACTGTTGCCCAAGTTATGCCACTGCCATATACTGATTCAACAGAACAGCGTCTACATCTAATTATAGATGTTAATCAGCAAGCATATCTGTACCCCAAGACTCCCGAAGCTATTCATATTTTGCAACATGAGTTTGCAAATGTATACTGGTACTCGGTTGATGCTGACAATGGTATTATTAGAGGCCATGCCTTAAATAGCAGATGCAATGGTGAAGTCGTGGATGAATACTGCTTTGACTTAAGGGACTTGTGGTCAATTGTATTCCCATCTGAGTCAGAAAGGATACTTGCAACTATGACAAGGAAATCAAATGAGGTGGTTCATACTCAAGCAAAAGTTATGACTAACCAAGATGTGATGTATAAGTATATATCGAAAAATCTACTATTTGTTGCAAATGTGGCTCCAAAAGCTATAGGTGAAATTGGGACAGCAACTCCAGAGGAGTCATGGTTGgtcatttatattattgataCAGTGACTGGTCGGATTTTGCATCGCATGACTCATCATGGTTGTCAGGGTCCCGTTCAAGCTGTATTTAGTGAGAACTGGGTTGTCTACCACTATTTTAATCTCAGAGCACACAGATACGAGATGTCCGTCGTTGAGGTCTATGATCAATCTCGTGCGGATAACAAAGATGTTTGGAAGCTTGTTCTTGGGAAGCATAATCTAACATCACCCTTCTCTTCATATTCTCGACCAGAAGTCATAACAAAATCACAATCTTACTACTTCACCCATTCTGTTAAGGCAATAGAAGTGACTTCTACTGCCAAGGGTATAACCTCTAAGCAGCTGCTTATTGGAACAATTGGTGATCAGGTTTTGGCTCTTGATAAACGTTTCTTGGATCCCCGGCGAACACTCAATCCCTCACAAGCCGAGAAGGAAGAAGGAATAATTCCTCTTACTGATTCGTTACCAATTATTGCACAGTCTTATATCACACATTCCCTCAAGGTGGAAGGTCTCCGAGGTATAGTAACTGTACCTGCCAAGCTGGAGTCTACGTCCCTAGTCTTTGCATACGGAGTAGATCTATTTTTTACCCGGATTGCTCCGTCAAGGACTTACGATTCACTAACTGAAGATTTCAGCTATGCTCTACTTCTTATCACAATAGTTGCGCTTGTAGCAGCCATATTTGTTACTTGGGTATTATCAGAAAGGAAAGACCTGCAGGAGAAGTGGAGGTG 2957 0.4018 MAMAIRAFLMFVLFLFSTQFCFSLYEDQVGLMDWHQQYLGKVKHAVFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRQILGTNDIVDGLDIALGKYVITLSSDGSMLRAWNLPDGQMVWESSLQGSKLSKSILNVPKNLKADKDDLILVFGQGCLHAVSSIDGEVLWKKDFSGQSIEVQQITHSPHNDLIYVAGYVGSSKFYVYQINAKNGELLKDNTAALPSGTYGELLSVSSDMFVTLDDTRSKILLINLKNGEINYNDNHISDLIKDTSGQGVILPSRLPGIFALNLDSLGILIKVTNEGGLVLVEKINNAAALSDAVSISDGQHAFAFVQHEENKIHLTVKDVHNWNSDLLKERIVIDHQRGNVEKIFINNYVRTDRSNGFRALIAMEDHSLLLVQQGEIVWSREDGLASVVDVTTSDLPVEKEGVSVAKVEQNLFEWLKGHILKLKGTLMIASPGDVAAIQAMRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRIVWSVLLRTLRKSEACERPIGLNIYQWQDPHHHALDENPSVFVVGRCGPSLAAPAVLSFIDAYTGRELNSLSLAHTVAQVMPLPYTDSTEQRLHLIIDVNQQAYLYPKTPEAIHILQHEFANVYWYSVDADNGIIRGHALNSRCNGEVVDEYCFDLRDLWSIVFPSESERILATMTRKSNEVVHTQAKVMTNQDVMYKYISKNLLFVANVAPKAIGEIGTATPEESWLVIYIIDTVTGRILHRMTHHGCQGPVQAVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRADNKDVWKLVLGKHNLTSPFSSYSRPEVITKSQSYYFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIIAQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTRIAPSRTYDSLTEDFSYALLLITIVALVAAIFVTWVLSERKDLQEKWR 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00196 985 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 514 IPR011047 -
Bva10g00196 985 SMART ire1_9 484 515 IPR018391 -
Bva10g00196 985 SMART ire1_9 142 172 IPR018391 -
Bva10g00196 985 PANTHER UNCHARACTERIZED 9 985 IPR026895 GO:0072546
Bva10g00196 985 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 489 775 IPR011047 -
Bva10g00196 985 Pfam ER membrane protein complex subunit 1, C-terminal 767 984 IPR011678 -
Bva10g00196 985 Pfam PQQ-like domain 53 260 IPR002372 -
Bva10g00196 985 Gene3D - 28 332 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00196 Bva-Chr10 3285383 3291510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00196 K23562 - gmx:100790095 1692.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00196 10 3285383 3291510 Bva10g00196 10 3285383 3291510 ECH