Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00195 ATGACTTCTATTAGAAGAACTTTGCCTCCAGTGCCTCGAGCTGGATCTGTAGCAAATGGAGATGATTGTTCAGTGGCTTCTCCCTTGTCTAAGTCCTCATCAAGTCCTCAGAACTGTCCACCATCCACTGGACTGTTATCTCCTTCGGTCAATTCATTGGACTCTCTTGCTTTTATTCTTGGCATTTTCTCACCAAGATCTTTGAGGGTTCACGATAGGTCAAAGCCAAAGGGCCACGTTTGGAGGAAAGTGCTTTctcatttcttaatttgtttcatgATTGGGGTTACTATTGGACTCACATCACTTGCTTCAATGAGCTTGTCCATGAATCTCATGTCAGAGCACCAAGCCTTCTCATTTGAGGTTGTATCTGCTGTTGGAAAATTTCATTCACATGAAAATGTGATGAAGAATGTGACAGCGTCTGCCAATATGGCTATGGAGATTAATGCTACTTTGGATTCAACAATGAAAGAACAGAAACTAAAAGATGAggtatcatataatatatccatTAGCCAACTACTCAACAAAGAGCAATATTTGGAGCCTCAGAAGCTTCTCATAATTGTGACCCCAACATTTAATCAGCCATTTCAAGTGTATTACTTGAGTCGCTTGGCACACACATTAAAATTAGTTCCACCTCCTTTGTTGTGGATTGTTGTTGAGATGTCTTCCCAATCTGAAGAAACAGCTGACATATTGAGGAGAAGTGGCGTTATGTACAGGCATCTCGTTTGCAAAACAAATCTAACCAACACAAGCGATAGGGCCATTCTTCAAAGAAATGTTGCACTAGCTCATATTGAAACTCATCATCTTGATGGAATTGTTTACTTTGCAGATGATGATAACATCTACTTGGCGGAGCTCTTTCAGCAAATGAGGGAGATAAGTCGATTTGGAACATGGATAGTGGGCAAATTATCAGTGGATAAAAGTAGCATTGTATTGCAAGGGCCCATTTGTAATGGAAATCGAGTAATAGGATGGCACATAAATGAATCTAATAGTAGATCTCAAAGATTTCATGCTGAAATGCCAGGCTTTGCCTTCAATAGTACCATACTCTGGGATCCAAAGAAGTGGCACCGACCCACTCTTGAACCTATCAGGCAGCTTGATACTGTCAAGGAAGAATTCCGGGTTAGCACATTGATTGAACAGCTTGTTGAAGATGAAAACCAAATGGAAGGCTTAATGAACAACTGCTCGACAGTTATGGTTTGGCATATTGATCTTGGATCATCTGTTTCCTTCTACCCTCAGAGATGGATTATGAAGAACAACTTAGATGTCATCCTTCCAATTGCATA 1322 0.3949 MTSIRRTLPPVPRAGSVANGDDCSVASPLSKSSSSPQNCPPSTGLLSPSVNSLDSLAFILGIFSPRSLRVHDRSKPKGHVWRKVLSHFLICFMIGVTIGLTSLASMSLSMNLMSEHQAFSFEVVSAVGKFHSHENVMKNVTASANMAMEINATLDSTMKEQKLKDEVSYNISISQLLNKEQYLEPQKLLIIVTPTFNQPFQVYYLSRLAHTLKLVPPPLLWIVVEMSSQSEETADILRRSGVMYRHLVCKTNLTNTSDRAILQRNVALAHIETHHLDGIVYFADDDNIYLAELFQQMREISRFGTWIVGKLSVDKSSIVLQGPICNGNRVIGWHINESNSRSQRFHAEMPGFAFNSTILWDPKKWHRPTLEPIRQLDTVKEEFRVSTLIEQLVEDENQMEGLMNNCSTVMVWHIDLGSSVSFYPQRWIMKNNLDVILPIA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00195 440 Pfam Glycosyltransferase family 43 208 415 IPR005027 GO:0015018|GO:0016020
Bva10g00195 440 Coils Coil 385 405 - -
Bva10g00195 440 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 437 - -
Bva10g00195 440 CDD GlcAT-I 187 413 IPR005027 GO:0015018|GO:0016020
Bva10g00195 440 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 188 430 IPR029044 -
Bva10g00195 440 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 437 IPR005027 GO:0015018|GO:0016020
Bva10g00195 440 MobiDBLite consensus disorder prediction 23 44 - -
Bva10g00195 440 SUPERFAMILY Nucleotide-diphospho-sugar transferases 188 432 IPR029044 -
Bva10g00195 440 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00195 Bva-Chr10 3280329 3284672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00195 1 437 Glycosyltransferase AT1G27600 44.749 2.18e-122 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00195 K20869 - gmx:100808765 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00195 10 3280329 3284672 Bva10g00195 10 3280329 3284672 ECH