Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00192 atgatgaGCATGTCTTCCTCTTTGAAACCCACGAAGGGTGGTTTAAGAACCATGCCCTTTATCATAGTGAATGAATGTTTTGAGAAGGTGGCTAGCTTTGGAATTTTGCCCAACATGATATTCTACTTGAAAGAGGTTTACCACCTGCAAACAGTGAGTGCCACCAGCATTCTCTTGGCTTGGTCTGCTATTTCTGAGCTCATGGCCATTTTTGGGGCTTTCCTTTCTGATTCATACTTGGGCCGCTTTCGTGTCATCCTCATCGGTTCCATCTCCAGCCTTTTTGGGACGATCCTTTTGTGGTCAACGGCCATGATCCCACAGCTACAACCTCGTTCCTGTGAATCATTGGTCCAAGTCTGCAAATCTGGTACAGATGCCCAATTAACTGTCTTGTTCTTTTCATTTGGACTGATATCCATTGGAGCAGGTTGTGTTAGACCTTGTTCCATAGCCTTCGGAGCAGATCAACTGGCAATTAAAGAAAATCCCAATAATGAGAGGATCTTGGATAGCTACTTCTGTTGGTATTATGCTTCTAGTGGAGTATCAATCGTTATAGCGTTTACCACAGTTGTGTACATTCAAGATAACCTAGGATGGAAAGTTGGGTTTGGAGTACCTGCAATGCTCATGTTCTTATCTAATCTAATGTTCTTATTTGGTTCTCCATACTATATCAAACTCAAGCCCAATAAAAGCTTACTAACTGGTTTTGCTCAAGTACTCTTTGTGGCCTTAAAAAACAGGAAACTTAACCTTGCTCAGCGTAGCGTTGATCAATATTATCATGATCATGATGAGGAGCTTCTAGTCCCTACAGATAGCATAAGGTGTTTAAATAAAGCTTGCATAATAGTAGATCGTGAGAGAGACATAAATCCAGATGGGTCAGCTTCAAATTCATGGAGCTTATGCACAGTGGAACAAGTGGAGTCACTCAAGGCTCTGCTTAGAGTCATCCCCATGTGTTCCACAGGTATTCTTATGCTGTTATGTATCAATCAGAGCACATTCACCACCCTCCAAGCACAAACCATGGACAGAAGAATATTTGGCCATTTCCAGATTCCTGCAGGATCCTTCACTTCTATCATGATTATCATCTTAACAATATGGGTTGCTTTCTATGACCGCATTCTGGTTCCCTTGCTATCAAAATTCACCGGCTGCCCTAGAGGACTCAGCTGTAAAGTCAGAATGGGCATTGGTTTGTTACTTGTATGTGCAGCCAGGGCAATGTCAGCAATGATTGAGACCTTTAGAAGAAGTGAAGCAATCGAACAAGGGCTGGAGAACTATCCTGATGGCATGGTTAACATGTCAGCTTTATGGCTAGTTCCAGAGTATGCATTGCTTGGAATTGCTCAGGCTTTCAATGCAATAGGGCAGATAGAGTTTTTCTACTTCTATTTCCCTAAGAGCATGTCTAGTTTTGCAATGGCACTTTACACCCTTGAAATAGCTGCTTCTGACATGGTTGGTACTCTGCTGGTAAACATTGTGGATAAGGTTACCAGCAAAGGAGGGAAAGAGAGCTGGCTGTCAAGCAACATTAACAGGGGTCAcctcaattattattatggatTGCTTACTTTCTTGGGTTTGATTAACTACCTATATTTTCTTGCCATTTGTTGGGCTTCAGGACATACAGAGGAGGGAAAAACTGGAACTTCAGAGATCACAGAAGATGAGCAAATAGATTACAGGGAGTTACCTTCGTCATA 1730 0.4168 MMSMSSSLKPTKGGLRTMPFIIVNECFEKVASFGILPNMIFYLKEVYHLQTVSATSILLAWSAISELMAIFGAFLSDSYLGRFRVILIGSISSLFGTILLWSTAMIPQLQPRSCESLVQVCKSGTDAQLTVLFFSFGLISIGAGCVRPCSIAFGADQLAIKENPNNERILDSYFCWYYASSGVSIVIAFTTVVYIQDNLGWKVGFGVPAMLMFLSNLMFLFGSPYYIKLKPNKSLLTGFAQVLFVALKNRKLNLAQRSVDQYYHDHDEELLVPTDSIRCLNKACIIVDRERDINPDGSASNSWSLCTVEQVESLKALLRVIPMCSTGILMLLCINQSTFTTLQAQTMDRRIFGHFQIPAGSFTSIMIIILTIWVAFYDRILVPLLSKFTGCPRGLSCKVRMGIGLLLVCAARAMSAMIETFRRSEAIEQGLENYPDGMVNMSALWLVPEYALLGIAQAFNAIGQIEFFYFYFPKSMSSFAMALYTLEIAASDMVGTLLVNIVDKVTSKGGKESWLSSNINRGHLNYYYGLLTFLGLINYLYFLAICWASGHTEEGKTGTSEITEDEQIDYRELPSS 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00192 576 MobiDBLite consensus disorder prediction 553 576 - -
Bva10g00192 576 Pfam POT family 83 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva10g00192 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 552 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva10g00192 576 Gene3D MFS general substrate transporter like domains 2 555 IPR036259 -
Bva10g00192 576 PANTHER OS01G0761500 PROTEIN 10 552 - -
Bva10g00192 576 SUPERFAMILY MFS general substrate transporter 16 544 IPR036259 -
Bva10g00192 576 MobiDBLite consensus disorder prediction 557 576 - -
Bva10g00192 576 CDD MFS_NPF1_2 18 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00192 Bva-Chr10 3273214 3273978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00192 9 569 Organic Solute Cotransporters AT1G52190 52.007 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00192 K14638 - gmx:100783985 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00192 10 3273214 3273978 Bva10g00192 10 3273214 3273978 ECH