Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00190 ATGGTGACAAAGGAGATTCCAATGTCAGTGAACTCGACGAGCTCAAAATGCTCAGATCATAGGCTGGAGAACATAGATGAAAATGCTCCTGCAAATTGGTCAGCAGTGTCTAGTGCCCCACCTGAAACTCCAACTGAATCCATGGAGTTTCTTGCAAGGTCATGGAGTCTTTCGGCCATGGAACTCTCCAAAGCGCTGCACAACACCAATATTACGACTTCTCCTGGTTTTGAGGTGCCACTTCCTTGCCCTGTTGTTGCTGAAGTCAATGCTAAGGACTCCACTGCTTCAAAGGATtctTTACATAATGGGTGTAGCCCTCCAATTTCATCAAGAGACAGAGATGAAACGAAGGAGTTATTTTTACTCCATCAAGCACTCAACCCAGAATTCCTTTCCGCAgtttgctcttttttttttttaccgttGGTGCAAATTATTTGTCAGCAGCTTTATAGGAGCTTGCTAAGGGGGAAGACAACGGGTAGGTGGCTTAAAGAtcaaaaagagaggaaaaagcaagaaattaGGACTCAAAATGCTCAGTTGCACGCCGCAGTATCTGTGGCAGGTGTTGCTGCTGCAGTTGCAGCAATTGCAGCTTCAACAGCTACACCTTTAATGCCATCTGCCAACCATAAGAACCCACCCAAGACTTCTGCAGCAATTGCATCTGCAGCAGCTTTAGTAGCATCTCACTGTATTGACATTGCAGAAGAAATGGGAGCTGAACATGATCAAATCTTAACGGTAGTCAACTCTGCCATTAATGCAAAGACCAATGGAGATATAATGACCCTAACAGCAGGAGCAGCTACAGCCTTGAGAGGAGCTGCTCTTCTAAAGGCAAGGCAGCAGAAGGGGCTCGGAACCACAACGTTTGCATTAGTAGAGGAGAAATGTGAAGAAGGCAAAGAACCAAACATCTTGAGCACAGTGGACTGTGTCTCTAGGGGAGGAGAACTTCTCAAACGTACAAGAAAAGGCGCTCTTCACTGGAAGCAAGTTTCGttcaatataaattcaaatttccaGGTTGtagtcaaaatgaaaagcaaGCATATGGCAGGAGCATTCacgaaaaagaagaaatATATAGTCATTGGAGTCTGCGACGATATCCCAGCTTGGCCTGGAAGGGAAAGGGAAGACACCAGTGAAAATAAGGgttattttggaataaaaacaGCCGACAGAATTATAGAATTCGAATGTGGGAGTAAAGGCGACAAACAAATTTGGATCGAGGGGATCCAGTATATGTTGAGATGTCGTGCTAAAGTAACATG 1289 0.4143 MVTKEIPMSVNSTSSKCSDHRLENIDENAPANWSAVSSAPPETPTESMEFLARSWSLSAMELSKALHNTNITTSPGFEVPLPCPVVAEVNAKDSTASKDSLHNGCSPPISSRDRDETKELFLLHQALNPEFLSAVCSFFFLPLVQIICQQLYRSLLRGKTTGRWLKDQKERKKQEIRTQNAQLHAAVSVAGVAAAVAAIAASTATPLMPSANHKNPPKTSAAIASAAALVASHCIDIAEEMGAEHDQILTVVNSAINAKTNGDIMTLTAGAATALRGAALLKARQQKGLGTTTFALVEEKCEEGKEPNILSTVDCVSRGGELLKRTRKGALHWKQVSFNINSNFQVVVKMKSKHMAGAFTKKKKYIVIGVCDDIPAWPGREREDTSENKGYFGIKTADRIIEFECGSKGDKQIWIEGIQYMLRCRAKVT 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00190 429 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 11 428 - -
Bva10g00190 429 Pfam Auxin canalisation 41 293 IPR008546 -
Bva10g00190 429 PANTHER EXPRESSED PROTEIN 11 428 IPR040269 -
Bva10g00190 429 ProSiteProfiles PH domain profile. 315 423 IPR001849 -
Bva10g00190 429 Coils Coil 166 186 - -
Bva10g00190 429 Pfam Plant pleckstrin homology-like region 321 425 IPR013666 -
Bva10g00190 429 SUPERFAMILY PH domain-like 303 421 - -
Bva10g00190 429 SMART PH_update 316 425 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00190 Bva-Chr10 3260129 3260332 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00190 - - gmx:100814154 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00190 10 3260129 3260332 Bva10g00190 10 3260129 3260332 ECH