Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00187 ATGGCAACTTCATCTACGTCATTTCAAGTAAATTGCTGCATCCAGAAAAACCACAGTGCCCAGGACAGGTTTCATCACTTCAATGTCTCACTCGCCTCTGTTCTCAAGCCAATCTTGAGAGATTTGCCAAAAGTTCCCTTGCAAATCGACGTTTCCAAGATCATGGCAAATGCTACGACCAAATTACTAGACACTTTGGTGGATTCATTATTCGAATTCATCGACCAACCATTGCTTCCATCTCAGATTAACTTTGCCCCAGTGGAGGAGTTGGGAGAAGTCATGCCTATCACTAGCATCCAAGGCGGAATCCCACATGATTTTCCAGAGGGTGTCTACATAAGAAATGGGCCAAATCCAATTTTTGGACGGCTGAAATCTACAAAGTCTATATTTGGGAAGTCAAATCACATTTGGGTGGAAGGAGAAGGAATGCTTCatgctttatatttaaaaagagagattaaTGGGAGATGGAACATAGTCTACAACAACAGACACGTTGAAACTGAAACGTACAAGAttgagaaacaaagaaacaagccATTGTTTTTACCGGCCATACAAGGCGATCCACCGGCCATTTTGTCTGCTTATCTGCTAAACTGGTTGAGGTCTGGCAAAGTAAACAAATACATCAGTAACACCAATGTGTTTGAACATTCCGGGAAGTATTACTCAATTGCTGAAAATCACTGCCCACAAGAGATTGACATCTTCAGCctaaaaactttaaagaatTGGGATGTGGGTGGAGCCTGGACTCGACCTTTCATCAGCCACCCAAAGAAAGCTCCAGGAACCGAGGAACTAATTACATTGGGTGTCTCTCCAACTAAACCTTTTGTTGAAGTTGGAATAATTTCTGCCAATGGAAAGAAATTAGTTCGTAAAGTAGATATCAAACTAAAAAGGTGCAGTCTTTGCCATGAGATAGGCATTACAAAGAGGTACATTGTGATCCTGGATTTTCCACTAACCATAGATCTGAAGAGATTACTTAGAGGCGGCCAGTTGATAAAGTATAATAAGGAGGGATATGCAAGGATTGGGGTTATGCCTCTCTATGGTGATGCAGACTCAATCCAGTGGTTTGAGGTGACGCCTAACTGCACATTTCACATTATCAATTCCTTTGAGGATGACAATGAGGTTGTAGTGTTGGGCTGCAGAGCTCTTGATTCTCTAATTCCTGGACCTGACCCGAGTTCTAATGAATTTGATTCATTATCTCGTTGTTATGAATGGCGATTGAACATGCAAACTGGGCAAGTTAAGGAGAAAGACCTCAGTGGAGCCAAGTTACCATATATGGATTTTCCCATGATAAATGCTAATTTCACAGGtctaaaaaatagatatggaTACACTCAAGTAGTTGATCATATTGCCAGCTTAGCTGcagGTATGCCTAAATATAGAGGTCTAGCCAAGCTATACTTTGAAGAACCATATAGTCAGTTCTCTGAGAGTAAGGACCAAATTGGAGAAGCTATAGAGGTGGAATACCATATGTTTGAGAAGAACGTATTCTGCAGTGGAGCAACCTTTGTCCCTAAAGAAACAAGTttagaagaagatgatggtTGGATCATCACTTTTGTTCACAATGAAGAAACTGGCGGATCTCAAGTTCACATAATTGACACAAAAAACTTCTCTGGCGAAACAGTTGCAAAAATTACAATGCCTCGCAGAATCCCATATGGGTTTCATGGAGCTTTCATGCCAATGTCAAGGAAGAGTTA 1748 0.3919 MATSSTSFQVNCCIQKNHSAQDRFHHFNVSLASVLKPILRDLPKVPLQIDVSKIMANATTKLLDTLVDSLFEFIDQPLLPSQINFAPVEELGEVMPITSIQGGIPHDFPEGVYIRNGPNPIFGRLKSTKSIFGKSNHIWVEGEGMLHALYLKREINGRWNIVYNNRHVETETYKIEKQRNKPLFLPAIQGDPPAILSAYLLNWLRSGKVNKYISNTNVFEHSGKYYSIAENHCPQEIDIFSLKTLKNWDVGGAWTRPFISHPKKAPGTEELITLGVSPTKPFVEVGIISANGKKLVRKVDIKLKRCSLCHEIGITKRYIVILDFPLTIDLKRLLRGGQLIKYNKEGYARIGVMPLYGDADSIQWFEVTPNCTFHIINSFEDDNEVVVLGCRALDSLIPGPDPSSNEFDSLSRCYEWRLNMQTGQVKEKDLSGAKLPYMDFPMINANFTGLKNRYGYTQVVDHIASLAAGMPKYRGLAKLYFEEPYSQFSESKDQIGEAIEVEYHMFEKNVFCSGATFVPKETSLEEDDGWIITFVHNEETGGSQVHIIDTKNFSGETVAKITMPRRIPYGFHGAFMPMSRKS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00187 582 PANTHER BETA-CAROTENE DIOXYGENASE 28 578 IPR004294 GO:0016702
Bva10g00187 582 PANTHER OS06G0162550 PROTEIN 28 578 - -
Bva10g00187 582 Pfam Retinal pigment epithelial membrane protein 88 577 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00187 Bva-Chr10 3247304 3251202 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00187 - - gmx:100817738 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00187 10 3247304 3251202 Bva10g00187 10 3247304 3251202 ECH