Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00179 ATGATGTCGCGCCTCGGCGATGATGAACTGGGTCTTATCATCAGCTGTGTTCATGACCGCAACGACAGGAACTCTTTCTCTCAAGTCTGCAAGCAATGGCTGAGAGTCGAAGGTCTGACCCGTTTATCCATCAGGGTACTTGAACCCGATTCCCTCCGTAGCATCTTACCCAGATTCccgaatttaataaaatttgaatcttcCAAATCTATCACCAACGACGACCTTAAATTTTTGGCCCAACAATGCCCTAAACTTGAGGTTCTTAGCCTCAATTTTAGACGACGCCGCGGAATTTCTGACCACTCAGATGACTCATCGAGTTTCCAAGACATCGGAGACGGCGGTCTATGTGCTTTGGCTGTTGGGTGTATCGCATTGTCCCAAGTTTCACTTAGAAGAAGAACAAATATTGGGAATGCCGGGGTTATGTCCCTTGTCAATTCCGCGAAACATCTCAGGCATTTGGATTTGGGATGGTGTAATTTGATCACAGACGAAGCCCTTGAAGCAATTGGGGCAGCCAGTTCCATTGCTGTTCTAAATCTGCAAGGCTGTTCGTTGATTACAGATCGTGGTTTGGCATATTTAGCATCCGGGTTTTCGTCTAGATCTTTAAAAAGATTGATTGTTGCGGAATGCGATCGAATCACGGATTCTGGGGTGTGTCTTTTGCAGAAAATCTCTTGCTTGGAGGAGCTGAACATGGCAGAATGTGGGCCTAAGGTCACAGATATAGGCTGTTTGGCAATTGCGGCAATTGAAACTCTTAAGAAGTTGAATTTATCGTGGATGGTCAATGTATCGGACACAACGGTGGTTGCACTTGCTGAGCATAGCCAGAATTTGGTGTCTGTTGATTTCACGGGATGTGAATTGATAACTGGGACTGCTATTCGTGCTTTTGCTAATCATGGGAGTTTAGAAGCACTGGTTTTGTCTTCTTGTTACAATATCTGCGCTGATGATCTAGAGCATACCGTTCTTGGGTGCAAGTCATTGAAGTATATCGTGCTTGATAAAGGACTTCGAATGTGGATACCAGTGCCAATGCAGGAGAACATAAACAGATTCTGCGAGTTACGATGGAGATG 1094 0.4433 MMSRLGDDELGLIISCVHDRNDRNSFSQVCKQWLRVEGLTRLSIRVLEPDSLRSILPRFPNLIKFESSKSITNDDLKFLAQQCPKLEVLSLNFRRRRGISDHSDDSSSFQDIGDGGLCALAVGCIALSQVSLRRRTNIGNAGVMSLVNSAKHLRHLDLGWCNLITDEALEAIGAASSIAVLNLQGCSLITDRGLAYLASGFSSRSLKRLIVAECDRITDSGVCLLQKISCLEELNMAECGPKVTDIGCLAIAAIETLKKLNLSWMVNVSDTTVVALAEHSQNLVSVDFTGCELITGTAIRAFANHGSLEALVLSSCYNICADDLEHTVLGCKSLKYIVLDKGLRMWIPVPMQENINRFCELRWR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00179 364 Gene3D Ribonuclease Inhibitor 56 167 IPR032675 -
Bva10g00179 364 PANTHER OS03G0633100 PROTEIN 2 340 - -
Bva10g00179 364 SUPERFAMILY RNI-like 19 340 - -
Bva10g00179 364 Pfam Leucine Rich repeat 203 222 IPR001611 GO:0005515
Bva10g00179 364 Pfam Leucine Rich repeat 151 172 IPR001611 GO:0005515
Bva10g00179 364 SMART LRR_CC_2 150 175 IPR006553 -
Bva10g00179 364 SMART LRR_CC_2 257 279 IPR006553 -
Bva10g00179 364 SMART LRR_CC_2 83 115 IPR006553 -
Bva10g00179 364 SMART LRR_CC_2 203 228 IPR006553 -
Bva10g00179 364 SMART LRR_CC_2 124 149 IPR006553 -
Bva10g00179 364 SMART LRR_CC_2 176 200 IPR006553 -
Bva10g00179 364 SMART LRR_CC_2 230 254 IPR006553 -
Bva10g00179 364 SMART LRR_CC_2 280 305 IPR006553 -
Bva10g00179 364 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 2 340 - -
Bva10g00179 364 Pfam F-box 5 41 IPR041567 -
Bva10g00179 364 Gene3D - 1 41 - -
Bva10g00179 364 Gene3D Ribonuclease Inhibitor 175 357 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00179 Bva-Chr10 3188991 3190657 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00179 K10268 - qsu:112029922 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00179 10 3188991 3190657 Bva10g00179 10 3188991 3190657 ECH