Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00178 ATGGCTCACCTCTTCAGAGAACTCTCGCTGGGCCACTCCAAGAGGGAGGCATCACCGCCGACCATAATGCCTCCCAAATCTACCTTAGTCGCCGACGACCTTCCGTCGCCACTTGGCCAGCTCGCCGCCAAGCTCACTGATGCCGAGCTTAGACTAACTGCCTACGAGATCTTCATCGCTGCATGCCGTACCTCCTCCGGAAAGCCTCTCACATACGTTCCTAACTCGTCTATTAGCCATTCCGACTCTCCAAGTCACCACTCGCCCAATTCGCCTAACTCTCCCGCTTTGCAGCGATCCTTAACTTCTGCCGCAGCCAGCAAGGTCAAGAAGGCATTCGGCTTAAAATCACCTGGCTCAGGTTCCAAGAAGAGCCCTGGCTCCGGTTCCAGTTCTGGTTCGGTTCAGGCTAAGTCTAAGCGGCCGTTGACGGTCGGGGAGCTGATGAGGAATCAGATGAGGGTTTCGGAGGCAATGGATTCACGTGTAAGGAGAGCGCTGTTGAGGATTTCTGCTGGCCAGGTTGGAAGGCGGATTGAATCTGTGGTAGTTCCACTAGAGCTACTGCAGCAGCTTAAGCTTTCAGATTTTTCTGATCAACAAGAGTACGAAGAATGGCAGAGGAGAACCTTGAAAGTTCTTGAGGCTGGTCTACTTATGCATCCTTACATACCTCTGGATAAGTCAAATACTGCTGCACAGCGCCTGAGGCAGATCATTCACGGGGCTCTTGATAGGCCTATTGAAACtgggaaaaataatgaatctATGCAGGTTCTTCGTAGTGCTGTCATGTCTCTTGCAAGCAGATCATATGATGGATCTCTTACTGATTCATGCCACTGGGCAGATGGAATTCCTCTGAATCTCCGGCTCTATGAAATGCTTCTGCAATCCTGCTTTGATATTAATGATGAGTCATCTATAATTGAGGAATTCGATGAGTTAATGGAACAAATCAAGAAGACCTGGGGAATCCTTGGACTGAACCAAACACTTCACAATCTCTGCTTTACATGGGTTTTATTTCACCATTTTGTTGTGACTGGGCAGATGGAAATTGGCCTGCTTTGTGCTGCTGATACTCAGCTAGCAGAAGTTGCAAAAGATGCAAAGACAATAAAGGATCCAGAgtactcaaaaattttaagttccaCCTTGAGTTCAATATTGGGGTGGGCAGAGAAAAGACTTCTTGCATATCATGAAACTTTTGATCTTGGAAATGTTGAAACCATGCAAGGGATTGTGTCTTTAGGAGTTGCAGCAGCTAAAATTCTGGTTGAAGATATATCTAATGAGTAtcggagaagaagaagaaatgaagtgAATGTGGCCCGTGAAAGAATTGACACTTACATAAGATCATCACTACGTACTGCTTTTGCTCAGATAATGGAGAAGGCTGACTCTAGCAGAAGAGCCTCCAAAAATCAGCCAAACGCTCTTCCTGTTCTTGCCATTCTTGCCAAGGATGTAGGGAACCTGGCAGTTAATGAGAAGCAAGTATTTAGTCCAATTCTAAAGAGATGGCATCCTTTAGCTGCAGGTGTTGCTGTGGCCACTCTTCATGCTTGTTATGGAAACGAGTTGAAGCAATTCATCTCTAGTATTACTGAATTGACACCTGATGCAGTACAAGTGTTGAGAGCTGCAGATAAGTTGGAGAAAGATCTTGTTCAGATAGCAGTAGAAGATTCAGTGGACAGTGATGATGGTGGAAAAGCAATAATCCGTGAGATGCCACCATATGAGGCTGAAGCTGCAATTGCCAATCTGGTGAAAATCTGGATCAAGACTAGATTAGACAGAGTGAAGGAGTGGGTTGACAGAAATCTGCAACAGGAGGTTTGGAGTTCGCAAACAAATCAGGAAGGGTATGCCCCGTCTGCTGTTGAAGTTTTGCGAATCATAAATGAAACTTTGGATGCATTCTTTCAGCTTCCAATACCAATGCATCCTGCATTGCTTCCTGAATTGATGAATGGCCTTGACAGATGCCTTCAGTATTATGTTACAAAAGCAAAATCTGGCTGTGGATCACAAAATACATTTGTTCCAACATTGCCTGCATTGACTAGATGCACTATTGGGTCTAAGTTTCAGGGCtttgggaagaaaaaagaaaaattaccaaataCTCAAAAAAGAAGCTCTCAGGTTGCGACAAATGGGGACAGCTCATTTGGGATACCACAACTTTGTACTCGCATAAATACTTTGCACTGGATCCGGAGTGAATTTGATGTTCtggagaaaagaataattaccCTTCTTCGGAACTCTGAATCTGCTCATGAAGAAGATTTTTCAAATGGATTAGCCAAGAAGTTTGAACTATATCCCCCTGCTTGTATTGAAGGAATTCAGCAACTATGCGAGGCAGTGGCCTATAAAATCATCTTCCATGACCTAAACCATGTTCTATGGGATGGCTTGTATGTTGGGGATCCATCATCTTCCAGGATCGAGCCATTTCTGCAGGAACTTGAGCGTAACTTGATGATCATTTCAGATACAGTGCATGAAAGAGTTCGTACACGCATTATTACTGACATAATGAGGGCTTCCTTTGAAGGATTCTTGTTGGTTTTACTTGCTGGAGGCCCTTCTCGTGCCTTTTCCCGGCAGGATTCTCAGATCATAGAGGATGATTTCAAATCTCTTAAGGATCTATTTTGGGCCAATGGAGATGGCTTACAATCTGAATTAATAGACAAGTTTTCAACAACTGTGAGATGTATCCTTCCACTTTTCCGAACTGACACAGGGAGCCTCATTGAACAGTTTAGACGGGTAACCCTGGAGACATATGGCTCCTCTGCCAGGTCTAGACTTCCATTGCCTCCAACTTCTGGACAGTGGAATCCATCTGAACCAAACACACTGTTACGTGTTCTGTGCTACAGAAACGATGAAACAGCTACGAGGTTTCTGAAAAAGACATATAATCTACCGAAGAAACTGTA 2969 0.4318 MAHLFRELSLGHSKREASPPTIMPPKSTLVADDLPSPLGQLAAKLTDAELRLTAYEIFIAACRTSSGKPLTYVPNSSISHSDSPSHHSPNSPNSPALQRSLTSAAASKVKKAFGLKSPGSGSKKSPGSGSSSGSVQAKSKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELLQQLKLSDFSDQQEYEEWQRRTLKVLEAGLLMHPYIPLDKSNTAAQRLRQIIHGALDRPIETGKNNESMQVLRSAVMSLASRSYDGSLTDSCHWADGIPLNLRLYEMLLQSCFDINDESSIIEEFDELMEQIKKTWGILGLNQTLHNLCFTWVLFHHFVVTGQMEIGLLCAADTQLAEVAKDAKTIKDPEYSKILSSTLSSILGWAEKRLLAYHETFDLGNVETMQGIVSLGVAAAKILVEDISNEYRRRRRNEVNVARERIDTYIRSSLRTAFAQIMEKADSSRRASKNQPNALPVLAILAKDVGNLAVNEKQVFSPILKRWHPLAAGVAVATLHACYGNELKQFISSITELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEAAIANLVKIWIKTRLDRVKEWVDRNLQQEVWSSQTNQEGYAPSAVEVLRIINETLDAFFQLPIPMHPALLPELMNGLDRCLQYYVTKAKSGCGSQNTFVPTLPALTRCTIGSKFQGFGKKKEKLPNTQKRSSQVATNGDSSFGIPQLCTRINTLHWIRSEFDVLEKRIITLLRNSESAHEEDFSNGLAKKFELYPPACIEGIQQLCEAVAYKIIFHDLNHVLWDGLYVGDPSSSRIEPFLQELERNLMIISDTVHERVRTRIITDIMRASFEGFLLVLLAGGPSRAFSRQDSQIIEDDFKSLKDLFWANGDGLQSELIDKFSTTVRCILPLFRTDTGSLIEQFRRVTLETYGSSARSRLPLPPTSGQWNPSEPNTLLRVLCYRNDETATRFLKKTYNLPKKL 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00178 989 PANTHER ELONGATION FACTOR TS (DUF810) 2 989 - -
Bva10g00178 989 MobiDBLite consensus disorder prediction 121 139 - -
Bva10g00178 989 MobiDBLite consensus disorder prediction 73 146 - -
Bva10g00178 989 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 546 689 IPR014770 -
Bva10g00178 989 MobiDBLite consensus disorder prediction 73 105 - -
Bva10g00178 989 PANTHER PROTEIN UNC-13 HOMOLOG 2 989 IPR008528 -
Bva10g00178 989 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 820 930 IPR014772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00178 Bva-Chr10 3179685 3184986 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00178 - - gmx:100814675 1637.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00178 10 3179685 3184986 Bva10g00178 10 3179685 3184986 ECH