Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00173 ATGACGTGTGCCTTCGCGGAGGACCCTTCGGCCCTGTCAACTTCACAGCTAATGACGCTGCCTACGTTGCCGGACGCAGTTGCAGGGGCAAGCCTCCGCGAGAGGTTTCGGCAGCTATTCTTCGGAGGAGGGACAGGGTGGACGAGAGCCATAATAGAGATAGAAGATGGTACAATGTGCCCTGTTTGTCTTGAGGAGATGGGGAAGGAAGACAGGGTGGTGGCTTGCGGGACATGCCGTAATCCCATTCACGAACAATGCTTGGTTAAATGGAAGAGGAGCAGGGTAAGGAGATCGGTTACTTGTGTGTTATGCAGAGCCAAGTGGAGGACAGAGCAGGATAAATATCTCAATCTCTCTGCTTACGTTAGCGAGGACGATGCCAATGACCCTCCTCCTTCTCCTCCCTGCACTGCCAATTA 422 0.5332 MTCAFAEDPSALSTSQLMTLPTLPDAVAGASLRERFRQLFFGGGTGWTRAIIEIEDGTMCPVCLEEMGKEDRVVACGTCRNPIHEQCLVKWKRSRVRRSVTCVLCRAKWRTEQDKYLNLSAYVSEDDANDPPPSPPCTAN 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00173 140 ProSiteProfiles Zinc finger RING-type profile. 60 106 IPR001841 -
Bva10g00173 140 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 15 127 IPR039903 GO:0061630
Bva10g00173 140 SUPERFAMILY RING/U-box 53 112 - -
Bva10g00173 140 Pfam Ring finger domain 59 106 IPR001841 -
Bva10g00173 140 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 121 IPR013083 -
Bva10g00173 140 PANTHER - 15 127 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00173 - - adu:107470742 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00173 10 3169664 3170543 Bva10g00173 10 3169664 3170543 ECH