Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00166 ATGGAGCAAGACAAGCAGCAAAGATGGGAAGGCAAGGTTTCAGCTCAGCTTAGAAATGCCACAGCGGATCAGATATGGCTGCTTCTCAAGGACTTCTTCAACTTTCACAAATGGTTTCCTAGCCTATCAACTTGTTACGGCGTTCACGGTTGTAACGGCGAGCCCGGTTGCATACGGTACTGTGCAGGCTTTTCTATCTCGTCCCACGGTAGTGAAAAGTCTGTGAGCTGGTCAAAGGAGAGATTAGTAGCCATTGATCACGTTGACCGAAGTTTAAGCTACGAAATCACTGACTGCAATATTGGGTTCAAGTCTTACAAGTCAACGATCAAGGTCGTCCCAGGAGTTAATGGTGGCGATGGCCAGGGCGGATGCGTCATTCACTGGTTCTTCACTGTTGACCCGGTGGAAGGTTGGGCACTGGAAGATTTGGCGAATAAGTATGATGTGGGCCTCCAAAGCATGGCTATCAAGATGGAGGATGAAATTGCAAATTCAGTGGATCCAGAAGGAGCAGAGAGATCGATGGCGGAGGAAAAATGGGAAGGTAAAGCCTCAGTTGAGGTAGGAAACAGCGGTGCGGACCAAGTTTGGTCTCTGATAGAGGATTTCTGCAACTTACATAAGTGGTTACCTATTGACACATGCTCCCAAGTAGAGGGGGTTGCTGGCCAGCCTGGTTTGATCCGCCACTGCACTTTCACCGCCAGAGATGGCGATGAGACCAAAGTCTTGTGGGCCAAAgagaagctagtcgaaatcgATCCGATCCAACGGTACTTGAGCTATGAGATTCTTGATAACAACCTCGGGATGGGATCATATGTGGCAACCATGAGAGTATTGCCCATCAACGGTGATGGTAGTAATGATGGCCGTGGCTGCCAGATCCAGTGGTCCTTTGTATGCGATCCAGTACAAGGGCAGACGTTTCAAGAATTCATGTCTTATATTGAGTCTAGTCTCCAGTTCATGGGCAACAAGATGGAGTCACATTTCTCTGCACCTACTCAACAGTG 1019 0.476 MEQDKQQRWEGKVSAQLRNATADQIWLLLKDFFNFHKWFPSLSTCYGVHGCNGEPGCIRYCAGFSISSHGSEKSVSWSKERLVAIDHVDRSLSYEITDCNIGFKSYKSTIKVVPGVNGGDGQGGCVIHWFFTVDPVEGWALEDLANKYDVGLQSMAIKMEDEIANSVDPEGAERSMAEEKWEGKASVEVGNSGADQVWSLIEDFCNLHKWLPIDTCSQVEGVAGQPGLIRHCTFTARDGDETKVLWAKEKLVEIDPIQRYLSYEILDNNLGMGSYVATMRVLPINGDGSNDGRGCQIQWSFVCDPVQGQTFQEFMSYIESSLQFMGNKMESHFSAPTQQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00166 339 SUPERFAMILY Bet v1-like 19 147 - -
Bva10g00166 339 Pfam Polyketide cyclase / dehydrase and lipid transport 19 148 IPR019587 -
Bva10g00166 339 Pfam Polyketide cyclase / dehydrase and lipid transport 186 322 IPR019587 -
Bva10g00166 339 SUPERFAMILY Bet v1-like 191 335 - -
Bva10g00166 339 CDD PYR_PYL_RCAR_like 181 333 - -
Bva10g00166 339 Gene3D - 174 338 IPR023393 -
Bva10g00166 339 Gene3D - 1 168 IPR023393 -
Bva10g00166 339 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 177 333 - -
Bva10g00166 339 CDD PYR_PYL_RCAR_like 9 156 - -
Bva10g00166 339 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 6 164 - -
Bva10g00166 339 PANTHER - 177 333 - -
Bva10g00166 339 PANTHER - 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00166 Bva-Chr10 3123211 3124720 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00166 - - mesc:110610503 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00166 10 3123211 3124720 Bva10g00166 10 3123211 3124720 ECH