Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00160 ATGGATGAAGAGAGAATACTTGAGAGTGAAAGGCTCCAGATCGAGCAGATTCGGCAGCTTGATCTCGAGGAATTGCAGGTTGAAGAAGTCGACGACCAAGACTCATCCGACGATGAACAGGACCCAACCGCTCGCACTGCCACACATGATGAATTCAACTTCAATACCTCTATAGTTTCTTTACATACTTATCTCGGTGAGGTTGATGACACGCACCACAGAACAGCTTTCTTGGATGGTGGTGCTATTTTGAACCTCccacttttctattttgaagGAGTTGTACTCTTTCCTGGGGCTACTCTTCCCCTAAGAGTTATTCAGTCCAATTTTATAGCCGCTGTTGAGAGAGCATTGGGCCAAGTTGATGTTCCTTATACCATTGGTGTGATTCGAATTTACAGGGATCCCCATAATCTTAGGATAAAATTGGCAACAGTTGGGACGACTGCAGAGATTCGACAATACCGGCGGCTAGAGGATGGTTCACTGAATGTGGTTACTCGTGGTCAACAGCGATTTCGCCTAAGACGCCATTGGATTGATGTTGATGGAGTGCCTTGTGGAGAGGTCCAAATTATCAACGAAGACCTACCTTTGAGAACACCAAGGGATGCTTTTGGCAGATTAGCACCATTAAGTAATCTTCCATCATGTTTGCTGGCTTCAAAGAATTCTCATGCTCAAATGCTTAGGTCCAAAACTGGAGAGACTGAATCAGAAGAAGATTCAGATGAAAGCTTTGAGAATGGGCTTTCACTAACAGAAAGAAGAATTCACCAATCTCTCACTAGTTCCAGTTATGAACATGAAATGACAGATGGATCTGCAAGCAGCGATGATGAATTCACATATGAGTCAGATCAGGAAGTTAGGTCTAATCCAAATGACCGAGACTCCATGAGAACATTGCTCTCTAATTCTGGGAAGGAAACTGAAATGGACTCAAGAATTGGGAACTGTTCCACTTCAGGAAAGCAATCCTACAAAGTAGAATTGTTTAGAAATTGTCGTAAAAATACAGATGCCTACCCATCACGTCGAATTTCTAGAGCATTCTGGCCCCATTGGGTATATCTTATGTTTGATTCCTATTGCCTTGCTCAAAGAGCAGCAGATTTGTGGAAGCAGATAGTTGGGGCGCCAAACATGGATGGTCTTCTGAAGAAGCCTGATCACTTATCATTTCTTATTGCAAGTAAACTACCTGTGTCTGAATCAACAAGGCAAGAGCTTTTGGAGATTGATGGCATTTCATATAGATTGCGTCGGGAAATTGAATTGCTTGAGAGCATAAATCTTATTCGATGTAAAAATTGCCGGACTATAATTGCAAGGCGAAGTGATATGTTGGTGATGTCTAGTGAAGGTCCCCTTGGTGCTTATGTGAATCCTGGGGGTTATGTGCATGAGATAATGACTCTCCTCAAAGCAAATGGACTAGCACTACAAGGACCAGCCGTCACAGAATTCAGTTGGTTTCCTGGTTATGCGTGGACAATCACGAACTGTGCCGCATGTGAGACCCAAATGGGATGGCTTTTTACAGCTACGAACAGGAAACTGAAACCTGGATCATTTTGGGGAATACGAAGTTCTCAGGTTGCAGAAGAAACGCGCTA 1622 0.4291 MDEERILESERLQIEQIRQLDLEELQVEEVDDQDSSDDEQDPTARTATHDEFNFNTSIVSLHTYLGEVDDTHHRTAFLDGGAILNLPLFYFEGVVLFPGATLPLRVIQSNFIAAVERALGQVDVPYTIGVIRIYRDPHNLRIKLATVGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRHWIDVDGVPCGEVQIINEDLPLRTPRDAFGRLAPLSNLPSCLLASKNSHAQMLRSKTGETESEEDSDESFENGLSLTERRIHQSLTSSSYEHEMTDGSASSDDEFTYESDQEVRSNPNDRDSMRTLLSNSGKETEMDSRIGNCSTSGKQSYKVELFRNCRKNTDAYPSRRISRAFWPHWVYLMFDSYCLAQRAADLWKQIVGAPNMDGLLKKPDHLSFLIASKLPVSESTRQELLEIDGISYRLRREIELLESINLIRCKNCRTIIARRSDMLVMSSEGPLGAYVNPGGYVHEIMTLLKANGLALQGPAVTEFSWFPGYAWTITNCAACETQMGWLFTATNRKLKPGSFWGIRSSQVAEETR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00160 540 SUPERFAMILY PUA domain-like 85 430 IPR015947 -
Bva10g00160 540 Gene3D - 363 427 - -
Bva10g00160 540 PANTHER CEREBLON 1 536 - -
Bva10g00160 540 MobiDBLite consensus disorder prediction 27 48 - -
Bva10g00160 540 MobiDBLite consensus disorder prediction 254 282 - -
Bva10g00160 540 CDD CRBN_C_like 435 535 IPR034750 -
Bva10g00160 540 SMART lon_5 85 431 IPR003111 -
Bva10g00160 540 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 434 526 IPR004910 -
Bva10g00160 540 Pfam ATP-dependent protease La (LON) substrate-binding domain 85 430 IPR003111 -
Bva10g00160 540 ProSiteProfiles Lon N-terminal domain profile. 86 431 IPR003111 -
Bva10g00160 540 ProSiteProfiles CULT domain profile. 432 539 IPR034750 -
Bva10g00160 540 Gene3D Peptide methionine sulfoxide reductase. 428 540 - -
Bva10g00160 540 MobiDBLite consensus disorder prediction 298 321 - -
Bva10g00160 540 PANTHER BNAA09G40760D PROTEIN 1 536 - -
Bva10g00160 540 MobiDBLite consensus disorder prediction 230 321 - -
Bva10g00160 540 Gene3D - 66 194 IPR046336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00160 Bva-Chr10 3093266 3098656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00160 K11793 - qsu:112003431 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00160 10 3093266 3098656 Bva10g00160 10 3093266 3098656 ECH