Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00139 ATGACAGAATCCGTTCCTTGCCTGATGAACCAGACAATGAAGGTGAAATCAATTGCTGTTGGGGTTCCACAGAGTTCCTTGTCGCCCTCACATCCCAAGATAGATCATGAGGTTCGTCGTAATCATGTCTCCGATTGTTGTTCTGATCAATTGATTATCCAGAACCACGACAACTTCAAGCGTAGCGCTGCTCCTATGCGGTGCATGTTCTACCATGGATGGTCCTGGGTTGATTTCCAGAGCGACGTGGTTGAATCTTTTCGGTCTGCATTCCGTGAGGAGAAGCCGATGATCGAAGTGATAATCGGAGGATCCGAAAATGTTTTTGACTTCATTCGCATGGTCCAGATTGATCTTGGCTCCGGGCATCAGAGATCGATTGCCTGGATTGATGAAACCGGTAAACCTTTTTTTCCTAAGGTCTTTCTCGGCGAGGATTGGCTGGAGGATTCGGGAAATCCTCAAATTGAGATTGATGTTCGGATTCATGGGCTTGATGTCGATGGTAAGAGAAAGAGCTCGGCTTTAGATGAATTTGATATTGAGGTAAATTCGTCGAGCAAAAAGGATGAAGAGGAGGTTGTTTCCAAAAGACTGAGGTTGACCTCCGCCGCCTTGAATTGGCCCAATGCGAAATTGCTGAGTAAGAAAGATAAACAATATTTACTTGTAAGCAACTTATTTCTGTCTGGCATCAGGAAGGTTGGTCACGGAGCCACTATTACTGCAATTCATCAATGGGAACGCACAGGCCCACTTGAGAAAGCTCGTCTCCAAGTTTTTCAAAGACAGAACGAGATTACAAAAGCTGCTAGAAGTGCCTCTAATGCAGTTTTTGCTTGGTATGCGGCGCCAGCAAATGCAGTGCCTGGAATTTTGGCTCACGGATTTGGCTTCCCTAGCAAGATTTCCGGATCGCCATCTTATGGAATTGGCGTATATTTGTCCCCTGTTGGCTTGCCCCATCTTAGTGTTATGCAGTTGGAGCCAGATGATAACGGTGAGAAGCATATTATACTATGCCGCGTTATATTgggaaatattgaaaaagtcGAGGCGGGGTCTCAACAACGGAGTCCTTCCTGTGCGGATTTTGATACGGGTACTGATGACCTTGAGAATCCAAAGTGGTACGTGGTATGGAGCGCCAACATGAACAGACATATAATCCCCGAGTGTGTTGTGAGTTTCAAATCCTCCACTCATTTGACAggTCAATTGGGAGCACGTAATTGTACAAAGTATTCACTTAGTCTAATAATTTCAAAGATGAAGAACCGTCTTCCTTACTCCAAAGTGCAGGAATTGCTGACTTTGTATGGTGCTTTCAAGGCTGGAAAGCTGGTCAGAGAAGATTTCATAAATCATATGCGGGCAATTGCTGGtgataaattgattatgtCCATAATTCGGGAGATTCAGAGTGCAGGATG 1433 0.4403 MTESVPCLMNQTMKVKSIAVGVPQSSLSPSHPKIDHEVRRNHVSDCCSDQLIIQNHDNFKRSAAPMRCMFYHGWSWVDFQSDVVESFRSAFREEKPMIEVIIGGSENVFDFIRMVQIDLGSGHQRSIAWIDETGKPFFPKVFLGEDWLEDSGNPQIEIDVRIHGLDVDGKRKSSALDEFDIEVNSSSKKDEEEVVSKRLRLTSAALNWPNAKLLSKKDKQYLLVSNLFLSGIRKVGHGATITAIHQWERTGPLEKARLQVFQRQNEITKAARSASNAVFAWYAAPANAVPGILAHGFGFPSKISGSPSYGIGVYLSPVGLPHLSVMQLEPDDNGEKHIILCRVILGNIEKVEAGSQQRSPSCADFDTGTDDLENPKWYVVWSANMNRHIIPECVVSFKSSTHLTGQLGARNCTKYSLSLIISKMKNRLPYSKVQELLTLYGAFKAGKLVREDFINHMRAIAGDKLIMSIIREIQSAG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00139 477 ProSiteProfiles RST domain profile. 408 477 IPR022003 -
Bva10g00139 477 Pfam RCD1-SRO-TAF4 (RST) plant domain 418 474 IPR022003 -
Bva10g00139 477 PANTHER OS03G0230300 PROTEIN 50 473 - -
Bva10g00139 477 ProSiteProfiles PARP catalytic domain profile. 197 419 IPR012317 GO:0003950
Bva10g00139 477 Gene3D - 211 399 - -
Bva10g00139 477 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 50 473 IPR044964 -
Bva10g00139 477 SUPERFAMILY ADP-ribosylation 214 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00139 Bva-Chr10 2983729 2987909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00139 - - jre:108993148 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00139 10 2983729 2987909 Bva10g00139 10 2983729 2987909 ECH