Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00137 ATGGCCACTGATCGTCAGTTCCAGAAGAACAGCATGTACCTAGAAACCCCAGAAGATGGAGCAGTCAAGAACTTTGACGACGATGGACGAATCAAAAGAACTGGGACATGGGTGACTGCGAGTGCCCATATCATAACGGCTGTGATTGGTTCGGGAGTGCTGTCGCTTGCATGGGCAATAGCCCAAATGGGTTGGGTGGCTGGCCCTGCTGTTCTCTTCGCCTTCTCTTTTATCACCTACTTCACCTCCACTCTCCTCGCCGACAGTTACCGTTCACCTGACCCTGTCCACGGCAAGCGAAACTACACCTATTCCGATGTTGTCAAGAGTACTTTAGGAGGAAAGAGATTTCAGCTGTGTGGATTGGCCCAGTACATAAATCTCGTGGGTGTAACAATAGGCTACACAATAACAGCGTCAATTAGTATGGTGGCGGTGAAGAGGTCCAACTGTTTCCACAAACATGGACACGCCATTATGTCCTTTGCTTATTCCTCCATTGGCCTTGGCCTCTCCATAGCAAAACTCACAGGAGGGGGGCATCATGTACGAACAAGCCTAACTGGGGTGCAAGTTGGGGTGGACGTGTCTGGATCAGAGAAGGTTTGGAGGACCTTCCAAGCCATTGGTGATATTGCCTTCGCTTATGCATATTCTAATGTCCTCATTGAAATTCAGGATACCCTGAAATCAAGCCCACCCGAGAACAAAGTGATGAAGAGAGCAAGCTTAATTGGCATCATGACCACAACCATATTCTATGTCCTGTGTGGGTGTCTCGGTTATGCAGCATTTGGAAATGATGCACCAGGAAATTTCCTCACGGGCTTCGGATTCTATGAGCCCTTTTGGTTAATTGACTTTGCCAACGTCTGCATTGCCGTCCACTTAGTTGGGGCCTATCAGGTCTTCTGCCAACCCATATTCGGGTTCGTGGAGAAATGGAGCAGGGAAAGATGGTCTGAGAGTCAATTTGTTAACGGGGAATATGGTTTCAACATTCCCTTCTGCGGAACCTATAACATAAACTTCTTCAGGGTGGTGTGGAGGACAGCATATGTTATCGTCACTGCTGTGATAGCTATGATATTTCCATTCTTCAACGACTTCTTGGGATTAATAGGGTCACTGTCTTTTTGGCCATTAACTGTCTACTTCCCCATAGAGATGTACATCAAGCAATCTAAAATGCAGAAGTTTACCTTCACATGGACATGGATGAAGATATTGAGTTGGGCATGCTTGATCGTTTCTATTATCTCTGCTGCTGGCTCCATCCAAGGCCTCGCCCAAGCTCTCAAGAAGTACCAGCCCTTCAAAGCTCAGCAATA 1331 0.4718 MATDRQFQKNSMYLETPEDGAVKNFDDDGRIKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADSYRSPDPVHGKRNYTYSDVVKSTLGGKRFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHAIMSFAYSSIGLGLSIAKLTGGGHHVRTSLTGVQVGVDVSGSEKVWRTFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENKVMKRASLIGIMTTTIFYVLCGCLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLVGAYQVFCQPIFGFVEKWSRERWSESQFVNGEYGFNIPFCGTYNINFFRVVWRTAYVIVTAVIAMIFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMQKFTFTWTWMKILSWACLIVSIISAAGSIQGLAQALKKYQPFKAQQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00137 443 Pfam Transmembrane amino acid transporter protein 166 429 IPR013057 -
Bva10g00137 443 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 21 158 - -
Bva10g00137 443 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 158 437 - -
Bva10g00137 443 PANTHER OS05G0424000 PROTEIN-RELATED 21 158 - -
Bva10g00137 443 PANTHER OS05G0424000 PROTEIN-RELATED 158 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00137 Bva-Chr10 2970090 2975200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00137 8 441 Organic Solute Cotransporters AT5G49630 70.502 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00137 K24917 - gmx:100777963 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02864 06 17915910 17919153 Bva10g00137 10 2970090 2975200 BWGD
Bva10g00137 10 2970090 2975200 Bva10g00137 10 2970090 2975200 ECH