Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00135 ATGGCGGGATTATCACTTCCTCAGGATTCGTATTTTCTTGGATTTGATAGTTCCACGCAgTCATTGAAGGCAACTGTGTTGGACTCCAACCTCAACATTGTTACGTCAGAACTGGTTCATTTTGATTCTGAATTGCCTCATTACAAAACTAAGGATGGTGTATACCGAGATCCCTCTGACAATGGCAGAATTGTTTCACCCACCTTGATGTGGGTGGAAGCTCTAGATCTCATGCTTCAAAAACTCTCCAAATCGAAATTGGATTTTGGGAAGATTGCTGCTGTTTCAGGTAGTGGACAGCAGCATGGTAGCGTCTATTGGAAGAGTGGCACTTCTGAGATACTGTCATCTTTGGATCCCAAAAAAACATTGCTGGAACAGCTTGGAAATGCTTTTTCCGTAAAAGAATCTCCAATATGGATGGACAGTAGCACCACTGCACAGTGCAGGGAGTTGGAGAAAGCTTTTGGGGGAGCAATGGAATTGGCTAAAGTGACAGGATCACGTGGATACGAAAGATTCACTGGTCctcaaatcaagaaaatatttgagacaCAACCagatgtttataaaaaaactgAGAGGATCTCCCTTGTTAGTTCCTTCATGGCATCTCTTCTTATTGGCGCTTATGCTAGTATCGATCACGCTGATGGTGCAGGCATGAACTTAATGGACATAAAGGAAAAGGCATGGTCTAAAGTAGCACTAGAGGCAACTGCCCCTGGTTTGGAGTCAAAACTTGGAAAGTTAGCCCCTGCATATACTGCTGCCGGAAATATTAGTCCATATTTTGTAGAGAGgcACCATTTCAACAAGGACTGTTTGGTCATTCATTGGTCTGGAGACAACCCTAACAGTCTGGCAGGTTTAACACTAAATATCCCAGGAGATTTGGCAATCAGCCTCGGCACAAGTGACACTGTATTTATGATTGCCAAAGATCCTAAACCAGCATTAGAAGGACATGTTTTCCCTAATCCTGTTGATGCAGAAGGTTACATGGTAATGTTGGTTTACAAGAATGGGTCCCTCACTCGCGAAGATGTGCGCAACCGTTGTGCTGAGAAATCTTGGGACACTTTCAATAAATTTCTACAGCAAACACAACCTCTAAATGGTGGAAAAATTGGTTTCTACTACAAGGAGCATGAAATCTTACCCCCTCTACCAGTTGGTTTTCACCGCTATGTTGTTGAAAATTTCACTGGTGATACACTGGATGGACTGAATGAACGTGAAGAGAAGGAATTTGATCCTCCTTCTGAGGTACGAGCGATAATCGAAGGTCAATTTCTCTCAATGCGAGCTCATGCAGAAAGATTTGGCATGCCTTCTCCTCCAAAGCGAATAATAGCCACTGGAGGAGCATCAGCAAATCATTGCATCCTTGATTCATTAGCTTCGATCTTTGGCTGTGATGTGTATACAGTTCAAAGACCTGATTCAGCTTCTCTTGGAGCTGCGTTGAGGGCTTCTCATGGGTGGCTTTGCAGCAAGAAGGGCAGTTTTATCCCCATAGCTAGTATGTGCATGGACAAAACGTCGCTGGACTGCAAACTTTCAGTAAAGGCTGGGGATTCCAAGCTTGTTTCCAAGTACGCCTTGTTCATGAGAAAGAGACTTGAGATAGAGAACCGTCTAGTTCAAAAATTTGGACGCTGCTG 1667 0.4265 MAGLSLPQDSYFLGFDSSTQSLKATVLDSNLNIVTSELVHFDSELPHYKTKDGVYRDPSDNGRIVSPTLMWVEALDLMLQKLSKSKLDFGKIAAVSGSGQQHGSVYWKSGTSEILSSLDPKKTLLEQLGNAFSVKESPIWMDSSTTAQCRELEKAFGGAMELAKVTGSRGYERFTGPQIKKIFETQPDVYKKTERISLVSSFMASLLIGAYASIDHADGAGMNLMDIKEKAWSKVALEATAPGLESKLGKLAPAYTAAGNISPYFVERHHFNKDCLVIHWSGDNPNSLAGLTLNIPGDLAISLGTSDTVFMIAKDPKPALEGHVFPNPVDAEGYMVMLVYKNGSLTREDVRNRCAEKSWDTFNKFLQQTQPLNGGKIGFYYKEHEILPPLPVGFHRYVVENFTGDTLDGLNEREEKEFDPPSEVRAIIEGQFLSMRAHAERFGMPSPPKRIIATGGASANHCILDSLASIFGCDVYTVQRPDSASLGAALRASHGWLCSKKGSFIPIASMCMDKTSLDCKLSVKAGDSKLVSKYALFMRKRLEIENRLVQKFGRC 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00135 555 Pfam FGGY family of carbohydrate kinases, N-terminal domain 11 288 IPR018484 GO:0005975|GO:0016773
Bva10g00135 555 CDD FGGY_D-XK_euk 11 494 IPR042024 GO:0004856|GO:0042732
Bva10g00135 555 SUPERFAMILY Actin-like ATPase domain 11 290 IPR043129 -
Bva10g00135 555 PANTHER XYLULOSE KINASE-LIKE ISOFORM X1 1 555 - -
Bva10g00135 555 Pfam FGGY family of carbohydrate kinases, C-terminal domain 299 495 IPR018485 GO:0005975|GO:0016773
Bva10g00135 555 PIRSF GlpK 130 517 IPR000577 GO:0005975|GO:0016301
Bva10g00135 555 PIRSF GlpK 9 118 IPR000577 GO:0005975|GO:0016301
Bva10g00135 555 Gene3D - 292 478 - -
Bva10g00135 555 Gene3D - 13 510 - -
Bva10g00135 555 PANTHER SUGAR KINASE 1 555 - -
Bva10g00135 555 SUPERFAMILY Actin-like ATPase domain 296 495 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00135 Bva-Chr10 2952165 2956439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00135 K00854 - gmx:100778495 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00135 10 2952165 2956439 Bva10g00135 10 2952165 2956439 ECH