Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00128 atgGCGTCCTTCCGACGCACTTTGTCGCCGGCGTATCACAGTCGTCAATACCAAAACGGTGTTGGTCCATTTTCAGTTTCTTCTAATGCTCATAAGCTTGGCGCCAATAGTAAGTACTCATCGCCGTTTCCGTCGTTGGCTGCACATGTAGTGGGGTTGCGAAGGTTTCTTGCTGGAGTTATTATACGTCGGTACGCTCGAAAAGGGCACTGGAGAAGAGCGCTCGTCAGGTGTTTTATATGTTTCTTGTTAGGTTTTATGTTGGGTTTGTTTCCTTTTGGTAATGTTGTCGACGATATCCGACGTCAAGATATCTCGTTTGAGATTAAGCCGCCTCACGTGAATGCACAATTGGTCCCTCAGGATCATGTTCTTAAGCGCGAGGAGGGATTTGTCGTTGATCCAGTGACTTTGAGTACTGATAGTCTTAGTACAGTCAATGAGAGATTCGATTATGTACCGAGGAAGCAGTTGATTGTGGTGACTCCCACGTATAATCGGGCGCTTCAGTCCTATTTCTTGAATAGATTGGGTCAGGTGCTCCGGCTTGTTCCTCCACCAGTTCTGTGGATTGTGGTTGAAATGAACTCAGCTTCAATGGAGACTGCTGAAACGCTGAGGAAAACAGGCGTGATGTATAGGCATTTAGTTTGTACTAGGAACTCCACAACTGTGAAGGACAGAGGGGTTCACCAAAGGAATACCGCATTGGAGCACATTGAGCACCATAGACTTGATGGGATTGTCTATTTCGCAGatgatgataatatatattctctcGAGTTGTTTGAGACCTTGAGAGACATAAGCCGCTTTGGAACTTGGCCTGTAGCCATGCTTGCACAAAGCAAAAACAAGGCCGTCTTGGAGGGTCCAGTATGCAATTCAACTGAAGTGATTGGGTGGCATACAAatgagaaaagtaaaagacTTCGTAGGTTTCATGTTGATATGTCCGGTTTTGCTTTTAACAGCACAGTCTTGTGGGATCGTAAGAGATGGCGGCGCCCCACTTCAAGTCCTATTCGACAGTTAGACACAGTGAAGGAAGGTTTTCAGGAGACCACATTTATTGAACAATTAGTGGAAGATGAGAGTCAAATGGAAGGTTCACCTCCTGATTGTTCCAAAATAATGAACTGGCATCTCCATTTAGACGATTATGGTTTACCTTATCCTAGGGGATGGCTGCTACATAAAAATCTAGATGTTGTCGTCCCCATCAAGTG 1229 0.4402 MASFRRTLSPAYHSRQYQNGVGPFSVSSNAHKLGANSKYSSPFPSLAAHVVGLRRFLAGVIIRRYARKGHWRRALVRCFICFLLGFMLGLFPFGNVVDDIRRQDISFEIKPPHVNAQLVPQDHVLKREEGFVVDPVTLSTDSLSTVNERFDYVPRKQLIVVTPTYNRALQSYFLNRLGQVLRLVPPPVLWIVVEMNSASMETAETLRKTGVMYRHLVCTRNSTTVKDRGVHQRNTALEHIEHHRLDGIVYFADDDNIYSLELFETLRDISRFGTWPVAMLAQSKNKAVLEGPVCNSTEVIGWHTNEKSKRLRRFHVDMSGFAFNSTVLWDRKRWRRPTSSPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPPDCSKIMNWHLHLDDYGLPYPRGWLLHKNLDVVVPIK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00128 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 156 393 IPR029044 -
Bva10g00128 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 157 401 IPR029044 -
Bva10g00128 409 CDD GlcAT-I 158 386 IPR005027 GO:0015018|GO:0016020
Bva10g00128 409 Pfam Glycosyltransferase family 43 177 385 IPR005027 GO:0015018|GO:0016020
Bva10g00128 409 PANTHER GLYCOSYLTRANSFERASES 46 406 - -
Bva10g00128 409 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 46 406 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00128 Bva-Chr10 2891587 2895105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00128 1 409 Glycosyltransferase AT1G27600 62.228 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00128 K20869 - vvi:100248926 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00128 10 2891587 2895105 Bva10g00128 10 2891587 2895105 ECH