Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00127 ATGGCCACTGCTCTCAGAGACCAAGCACTCTCTCTCCTCGCCTCTGCTAATAACCATGGCGACTTGGCTGTTAAAATTGCATCTTTGAAACAAGCCAAAGATATTCTGTTATCAATGGAGCCATCTTTAGCCTCTGAGCTCTTCCCTTACTTGGTCGAGCTCCAGTCTTCCCCCGAGAGTCTCGTCCGCAAATTGCTCATTGAGGTAATTGAAGATATTGGTCTGAAAGCATTAGAGAATTCTTCTATACTGATGTCTGTACTATTAACGTTTTTACGGGATGGTGATGACATTGTGATAAAGCAATCTATTATTTGTGGCACAAAAATTTTCCGTGGTGTTTTGGAGGAGATGACAGTGCAgTTTCAACAATACGGCAAAGTTGAGAGGTGGCTAGAAGAGATTTGGATGTGGATGCTTAAATTCAAGGATGCTGTATTTGGGATTGCTTTGGAGCCTGGTTCTTTTGGAACAAAGTTGCTGGCACTGAAATTCTTGGAAACCTTTGTCTTACTTTTTACATCTGACGTCAGTGATCCTGAGAAATCAGTTACAGAAGGAAGTAGGCAAGCTTTTAATATCTCATGGCTGGTTGGTGGTCACCCTGTTCTTGATCCAGTTGTGCTCATGTCAGAAGCAAATAGGACTATTGcaatcttattaaatttactGCAGTCAGTTGGTAGTCTCCCTGGTTGCTTGACAATTACTGTTGTCAATTGTCTAGCAGCCATAGCAAGAAAAAGGCCACAGCACTACGAGACAGTTCTTTCAGCATTGCTTGATTTTGatccaaattttcaaacagCAAAAGGTTGTCATGCTGCCAGTATCCAATACTCCTTGAGAACTGCATTTTTGGGATTTCTAAGGTGCACATGTTCACCGATAATGGAGTCAAGAGAAAGATTGATAAGGTCCCTGCGGGCTATGAATGCAGGGGATGCTGCTGATCAAGTTATTCGCCAAGttgataaaatgattaaaattggTGATCGCTCTGTCCGTGATACTCGATTTAGCAAGGATGATCAATCATCAACTCAGCCACCTGTCTCAGGGGAATTATCTAGGAAAAGATCTGTCCCTCAAGATTATGAACAATTAGCTAATGGTCATGAGGCCATCTCTAAGCGGCTTCGTTCTGGTCCTGAGCCACACTCTTCTTTACCAGTTCAAATGAATGATTCTGGCCAGGACTCCAACTGTGTTAATGGAGTCCATCCAAATGTTCCTGTGCTGGATAGTGAACTATCTGCTGTGGAGCAAATGATTGCTGTGATTGGCGCTTTGCTTGCTGAAGGAGAAAGAGGCGTTGAATCTCTTGAAATTCTTATTTCAAAGGTTCATCCTGATCTGTTGGCTGATATTGTCATAACTAATATGAAGCACTTGCCTAGGACACCCCCACCATCAACAAGACTTGGGAATCTGCCTGTAACTCAACAAGTAGGTTCTCAAGGCAGTCAAGTGCAGGTTGTAGCAGCATCTGTTCCAATGAGTACGGTGCAATCCACAGGTGCTACTGCTCACATACCATTTCCTTCAGCTACAGCGGGTGGCACTAATTCCTCATTCTCTGACAACTCTAATGCCAATATTCTGCCTGCTGATTCTAAACGTGATCCACGCAGGGATCCACGTCGCCTGGATCCACGGCGCATAGCAGGAAATGCTGGATCAGTTATAGAAGATACTGGTGCTATGCACTCAGAGTATGATGATTCTGTTTCTATGAGTAAGCCTATTTCACATACTGTTGTGAGCACTGATGACAGTACTCTAGTAGCTCTTACATccaaaatgataaatgatGATAAGATCTCTGAAGGTCCACCAATTTTAGTACTGGAACAACCAAATCATAAAAACGAGGTTCTGGATAGGCTTGGAGAGATTGAGGGGATTCCGGAAGCAAATGCTTCTTCTGATCCCTCACTCTCTCCTGCTGCTATGATAGATGAGGATCTGAGTGCAGTGAAGCAATTGGATGTTACTGAAACGAATGGGACAGAATCATCATCTATTATTGAATCTGATCAGTTTTTTCCTGATGTCCCAATTGCATCTGCATCAGAAGATACCTGCCTGGAATTACCAGAGCTTCCACCATTTGTTGAATTATCCAAAGAGCAGGAAAATAATGTGATGCACATGGCAATCAAGCATATTATTGAGTCATGCAAGCATCTGCATGGGACAGATTGTCAGCAATTTTGCATGCCGTTACTTGCTCGGCTGGTAGCACAGATTGATGATGATTATGACGTTGTTTTGATGCTGCAAAAGCACACCATGGATGACCAATGGCAAAAGGGGCATGAGCTTGTGTTGCATGCTTTGTACCATCTGTACTGCCTCACGATATTGGATTCGGCTGGAAACTCTTCATCTACTGCTGTTCTGTATGAAAATTTCCTCTTGGGAGTGGCCAAATCTCTGTTGCACTCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTACTTGGTGAAGTACCACTTTTGCCTGAATCTTCCTTGAACATTTTGGAAGATCTCTGCTATTCTGATGTTATTGATCAGCATGGAAAAATTATTCGTGATGTTGAACGAGTGACACAAGGCCTTGGTGCTATCTGGAGTTTAATATTGGGGCGCCCACAAAACCGGCAAGCCTGCTTAGGTATAGCATTGAAGTGTGCTGTTCATCCACAGGATGAGATTCGAGCCAAAGCTATTCGGCTGGTGGCAAACAAACTTTATCAGCTTAGCTACATATCAGAGGATATTGAGCATTTTGCGAAAAGCATGCTGATGTCTGCTGTAGATCAGCAACTTTCAGATACAGGACTTTCACAATCTGGACCCACAGAACAAAGAGCTGAAGCAGAGGTTGATGACAGTCAGGAAAGAACATCACAAGTTTCAGAGTCCACAGCTTCTGAAACTGACGCCACTGGCGTTACTAAACCAGTGGTGCAAAGTGGTTCGCCTTTGTCTTTCTCTGAAGCTCAACGTCttatatctttgttttttgcttTATGTACAAAGAAACCCCACCTTCTTCAGATTGTATTTAATGTCTATGGGAGAGCACCTAAAACTGTCAAGCAGGCTTTTCATCGTCACATTCCAATTGTTATAAGGGCATTAGGTCAATCTTATTCTGATTTGCTACATATCATATCTGATCCACCACAAGGAAGTGAAAATCTTCTAACACTGGTGCTGCAAATACTGACTCAAGAAACAACACCATCGTCTGATCTTATTGCTACTGTTAAACGTTTAtatgaaactaaattaaagGATGTTACAATTCTTGTTCCCTTACTGTCATCACTTTCAAAAAATGAGGTTTTACCAATATTCCCTGGCCTTGTCAATCTTCCATTGGAAAAGTTCCAAAAGGCCCTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCTGCTTTGACACCTGTAGAAGTGTTGATTGCAATCCATGGAATTGTTCCTGAGAAAGATGGCCCTACACTTAAGAAGATAATGGATGCTTGCTCTGCCTGTTTCGAGCAACGTACAGTGTTCACACAGCAGGTTCTGGCAAAGGCATTGAACCAGATGGTTGATCAAACTCCATTGCCTCTCCTTTTCATGAGAACGGTTATACAGGCAATTGATGCTTTTCCTGCACTGgttgATTTTGTTATGGAGATACTGTCTAAACTTGTGACCAAACAGGTTTGGCGCATGCCTAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACTCAGCCACGTTCTTTTCACGTGTTATTGCAGTTGCCACCTCCACAACTGGAAAGCGCTTTAAACAAACATGCTAACCTCAAAGGTCCCCTTGCTGCCTACGCCAACCAACCAACTGTAAAATCTTCACTACCTAAATCAATATTAGGTGTTCTTGGTCTTTCAAATGAAACTCATATGCAGCAACATCTCTCAAACTCGTTACACCCTTCGGATACAAGTTCTTCAGTTCATGGAGCAACTCTAACGTA 4007 0.4175 MATALRDQALSLLASANNHGDLAVKIASLKQAKDILLSMEPSLASELFPYLVELQSSPESLVRKLLIEVIEDIGLKALENSSILMSVLLTFLRDGDDIVIKQSIICGTKIFRGVLEEMTVQFQQYGKVERWLEEIWMWMLKFKDAVFGIALEPGSFGTKLLALKFLETFVLLFTSDVSDPEKSVTEGSRQAFNISWLVGGHPVLDPVVLMSEANRTIAILLNLLQSVGSLPGCLTITVVNCLAAIARKRPQHYETVLSALLDFDPNFQTAKGCHAASIQYSLRTAFLGFLRCTCSPIMESRERLIRSLRAMNAGDAADQVIRQVDKMIKIGDRSVRDTRFSKDDQSSTQPPVSGELSRKRSVPQDYEQLANGHEAISKRLRSGPEPHSSLPVQMNDSGQDSNCVNGVHPNVPVLDSELSAVEQMIAVIGALLAEGERGVESLEILISKVHPDLLADIVITNMKHLPRTPPPSTRLGNLPVTQQVGSQGSQVQVVAASVPMSTVQSTGATAHIPFPSATAGGTNSSFSDNSNANILPADSKRDPRRDPRRLDPRRIAGNAGSVIEDTGAMHSEYDDSVSMSKPISHTVVSTDDSTLVALTSKMINDDKISEGPPILVLEQPNHKNEVLDRLGEIEGIPEANASSDPSLSPAAMIDEDLSAVKQLDVTETNGTESSSIIESDQFFPDVPIASASEDTCLELPELPPFVELSKEQENNVMHMAIKHIIESCKHLHGTDCQQFCMPLLARLVAQIDDDYDVVLMLQKHTMDDQWQKGHELVLHALYHLYCLTILDSAGNSSSTAVLYENFLLGVAKSLLHSFPASDKSFSRLLGEVPLLPESSLNILEDLCYSDVIDQHGKIIRDVERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHPQDEIRAKAIRLVANKLYQLSYISEDIEHFAKSMLMSAVDQQLSDTGLSQSGPTEQRAEAEVDDSQERTSQVSESTASETDATGVTKPVVQSGSPLSFSEAQRLISLFFALCTKKPHLLQIVFNVYGRAPKTVKQAFHRHIPIVIRALGQSYSDLLHIISDPPQGSENLLTLVLQILTQETTPSSDLIATVKRLYETKLKDVTILVPLLSSLSKNEVLPIFPGLVNLPLEKFQKALAHILQGSAHTGPALTPVEVLIAIHGIVPEKDGPTLKKIMDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNKHANLKGPLAAYANQPTVKSSLPKSILGVLGLSNETHMQQHLSNSLHPSDTSSSVHGATLT 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00127 1335 Pfam Symplekin/PTA1 N-terminal 98 319 IPR032460 -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 941 989 - -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 379 398 - -
Bva10g00127 1335 PANTHER SYMPLEKIN-RELATED 17 1335 - -
Bva10g00127 1335 Pfam Symplekin tight junction protein C terminal 1097 1275 IPR022075 -
Bva10g00127 1335 PANTHER SYMPLEKIN-RELATED 17 1335 - -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 335 363 - -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 521 560 - -
Bva10g00127 1335 SUPERFAMILY ARM repeat 11 1234 IPR016024 -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 538 553 - -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 965 989 - -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 1314 1335 - -
Bva10g00127 1335 Gene3D - 1 340 IPR011989 -
Bva10g00127 1335 MobiDBLite consensus disorder prediction 521 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00127 Bva-Chr10 2867325 2890909 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00127 K06100 - gmx:100789876 1932.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00127 10 2867325 2890909 Bva10g00127 10 2867325 2890909 ECH