Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00126 ATGGCTGTTTCAACCAGTTTCTCTGGTGCCAAATTGGAGGCTTTGTTGCTCAAATCTTCTTCCTGCTCATCAGGATCGTCGTCAATAGCCTCCACTGCAAccaatttgtcaatttttggCAAACCCAAAAGGACCCTGATTCAGAGAGGAGTAATTCGCTGCGAGGCTACTGCTTCAGAAGTAGTGGTTAAGTCTGATGATCCAAGCAATGCCAGCACTGTCTCCGCTCTTGAGCAGCTGAAGACTTCTGCAGCTGACAGGTATACAAAGGAAAGGAGCAGCATAGTGGTCATTGGGCTTAGTGTGCACACTGCACCTATCGAAATGCGTGAAAAACTTGCCATTCCTGAAGCAGAATGGCCTCGAGCAATTGGAGAGCTGTGTAATTTAAATCACATAGAAGAGGCTGCCGTTCTGAGCACTTGCAACAGAATGGAGATATATGTCGTTGCTCTGTCACAGCACCGTGGTGTCAAAGAGGTCATTGAATGGATGTCAAAGACAAGTGGGGTCCCTGTCTCAGAGCTTTGTGAGCACCAATTTTTGCTTTACAACAAAGATGCTATACAgcatatttttgaagtatctGCAGGTCTTGACTCTCTTGTATTAGGAGAAGGTCAAATCCTAGCACAGGTTAAGCAAGTTGTTAAAGTTGGACAAGGAGTTAATGGCTTTGGTAGAAACATTAGTGGGCTGTTCAAGCATGCAATCACTGTGGGGAAGAGAGTTAGGACTGAAACTAATATTGCTTCCGGGGCAGTTTCCGTGAGTTTAGCTGCTGTTGAATTGGCCCTGATGAAGCTACCTCAAGCATCGCATGATTGTGCCAGGATGTTAATTATTGGAGCTGGTAAGATGGGAAAGCTTGTGATCAAACATTTGGTGGCAAAAGGTTGCACAAAGATGGTGGTTGTCAATAGATCGAAGGAGAGAGTTGAAGCAATCCGCAAAGAATTTAAGGACATTGAGATAATCTACAGACCCCTCTCAGAAATGCTCAGCTGCATTGGTGAAGCAGATGTGGTTTTCACCAGCACAGCATCGGAAAACCCATTATTCTTAAAAGATCATGTTAAGGACCTTCCTCCTGCTAGTCAAGAAGTTGGAGGCAGCCATTTTTTCATTGATATCTCTGTTCCTAGGAATGTGGGTGCATGTGTCTCCGATCTTGATTCTGTGCGAGTGTACAATGTTGACGACCTTAAAGAGGTTGTGGCTGCTAATAAAGAGGATCGACTTCGAAAAGCAATGGAAGCTCAGGCGATCATTACTGAAGAATCAAAGCAATTTGAAGCTTGGAGGGACTCACTGGAAACTGTTCCCACCATCAAGAAATTGAGGGCTTATGCTGAAAGAATCAGGGTTGCTGAGCTTGAAAAGTGCTTAGGTAAGATGGGTGATGACCTTCCAAAGAAGACAAGGAGGGCTGTGGATGACCTTAGCAGGGGTATAGTGAATAAGCTGCTTCACGGCCCAATGCAACACCTGAGGTGTGATGGAAGTGATAGCCGGACTCTAAGCGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAGCCTTGAGACTGATATATCTGTTTTGGAGCGGAAAATTCGGGCCAAGGTGGAACAAAACCAGATGTG 1631 0.4427 MAVSTSFSGAKLEALLLKSSSCSSGSSSIASTATNLSIFGKPKRTLIQRGVIRCEATASEVVVKSDDPSNASTVSALEQLKTSAADRYTKERSSIVVIGLSVHTAPIEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVIEWMSKTSGVPVSELCEHQFLLYNKDAIQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSLAAVELALMKLPQASHDCARMLIIGAGKMGKLVIKHLVAKGCTKMVVVNRSKERVEAIRKEFKDIEIIYRPLSEMLSCIGEADVVFTSTASENPLFLKDHVKDLPPASQEVGGSHFFIDISVPRNVGACVSDLDSVRVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLGKMGDDLPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETDISVLERKIRAKVEQNQM 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00126 543 Gene3D - 93 253 IPR036343 GO:0008883|GO:0033014|GO:0050661
Bva10g00126 543 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 253 413 IPR036291 -
Bva10g00126 543 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 94 250 IPR036343 GO:0008883|GO:0033014|GO:0050661
Bva10g00126 543 Gene3D - 254 406 - -
Bva10g00126 543 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 417 503 IPR036453 GO:0008883|GO:0033014|GO:0050661
Bva10g00126 543 ProSitePatterns Glutamyl-tRNA reductase signature. 191 214 IPR018214 GO:0008883
Bva10g00126 543 TIGRFAM hemA: glutamyl-tRNA reductase 95 503 IPR000343 GO:0008883|GO:0033014|GO:0050661
Bva10g00126 543 CDD NAD_bind_Glutamyl_tRNA_reduct 95 417 - -
Bva10g00126 543 Pfam Shikimate / quinate 5-dehydrogenase 264 405 IPR006151 -
Bva10g00126 543 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 419 523 IPR015896 GO:0008883|GO:0033014|GO:0050661
Bva10g00126 543 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 542 - -
Bva10g00126 543 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 98 248 IPR015895 GO:0008883|GO:0033014|GO:0050661
Bva10g00126 543 PANTHER GLUTAMYL-TRNA REDUCTASE 1 542 - -
Bva10g00126 543 Hamap Glutamyl-tRNA reductase [hemA]. 94 521 IPR000343 GO:0008883|GO:0033014|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00126 Bva-Chr10 2858656 2861714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00126 K02492 - gmx:100815985 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00126 10 2858656 2861714 Bva10g00126 10 2858656 2861714 ECH