Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01869 ATGTCTGAAAATCATGTGCCAGCTGGAGCTGATGACTTTCTCCCTGTTCTCATATATGTTACGATCAAGGCCAATCCTTCACAACTGCAATCAAATCTCAAATTCGTCCAGTTGTACCGAAGGCAAGCAAAACTCATATCAGAACCCGCATATTATTTCACAAATCTTGTCTCAACTAAGGAGTTTATAGTTGACTTAAATGCTTCGTCTCTTTCAATTGATGAAATCACTTTTGAGGAGAGCATGCAAGCAGCGAAATCAATCAGTAAAGTCAGAAGTGAATCATCCTCTGCATCGAAAGTGAGCCAACTAGACGAATCACAGCACAGTCTTTCAAAGGAAATGTACCAGAAACACGAAGATTCTGGAGTTATGGTACATGGATCAAATTATCCCTATTTGGAAGCCAAGACTGGAGAGCTGACAGTTAGAGATGTGGACAGATTGTTAGGTCTCTACAAAGATGTAGTCACAAAGTACACAAGCCTCTGCAAAGCCATCAGTTTCCTTTCAACTTCTGAGAGAGAACCGCTCCTTCGTCATTTAGAAGGTGTACACCCTTATATGGACCTCCTCTCATCACACACTCAGAACAAACAAAAGTG 605 0.4116 MSENHVPAGADDFLPVLIYVTIKANPSQLQSNLKFVQLYRRQAKLISEPAYYFTNLVSTKEFIVDLNASSLSIDEITFEESMQAAKSISKVRSESSSASKVSQLDESQHSLSKEMYQKHEDSGVMVHGSNYPYLEAKTGELTVRDVDRLLGLYKDVVTKYTSLCKAISFLSTSEREPLLRHLEGVHPYMDLLSSHTQNKQK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01869 201 Gene3D VPS9 domain 1 90 IPR037191 -
Bva09g01869 201 SUPERFAMILY VPS9 domain 7 79 IPR037191 -
Bva09g01869 201 Pfam Vacuolar sorting protein 9 (VPS9) domain 2 65 IPR003123 -
Bva09g01869 201 PANTHER RAB GDP/GTP EXCHANGE FACTOR 2 166 IPR045046 GO:0005085|GO:0016192
Bva09g01869 201 SMART vps9_2 1 81 IPR003123 -
Bva09g01869 201 ProSiteProfiles VPS9 domain profile. 1 72 IPR003123 -
Bva09g01869 201 PANTHER OS03G0842700 PROTEIN 2 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01869 Bva-Chr9 13532109 13535882 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01869 K20131 - gmx:100791462 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01869 09 13532109 13535882 Bva09g01869 09 13532109 13535882 ECH