Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01011 ATGATGCCAGTGACGAGCCAAAGCCTTGATTTTGGTGGGAAAAATTTGGTTGCTTGTGGGTGTTCTTCCAGTACTTCATTTCAACGATATACAATGAGAAATTATGCCAAGGTCAATTCTGGAGGTTGGAGCAGAGGGCAAGGAGATCGTAAGTCTGTTAATTGTAAGAGGGGCACCACTCAATGTCGATTTTCTACTATTATGAAGATAGCAGAGACTACGGTAAATGGGGGGACTCAAGATAGTTTGGACTTGAAGAATTATTCTAGAGGCCTTATATCGCCTACTAAATTGTTTGAAGTGGTAGCAGATGATCTACAGACGCTcaacaaaaatcttaaatctATTGTTGGGGCAGAAAACCCAGTTTTAATGTCAGCAGCTGAGCAGATATTTGGGGCTGGTGGCAAGAGGATGAGACCAGCTATGGTTTTTTTGGTGGCAAGAGCAACTGCAgagctagttggattgaaGGAACTTACCATTAAGCATAGACGCTTAGCGGAGATAATTGAAATGATTCATACTGCAAGTTTGATACATGATGATGTATTAGATGAGAGCAACCTTCGAAGAGGAAAGGAAACTGTTCATCAAGTATACGGAACAAGAGTGGCAGTGTTGGCTGGTGACTTCATGTTTGCACAGTCATCATGGTATCTTGCCAACCTTGAAAACATCGAAGTGATAAAACTTATAAGCCAGGTGATTAAAGATTTCGCGAGTGGCGAAATAAGGCAGGCTTCTGGCTTGTTTGATTGTGACCTTCCACTAGAAGAATATCTAATCAAGAGCTACTATAAAACAGCCTCCTTGATCGCCGCAAGCACAAAGGGAGCTGCAATTTTTAGCGGCACTGACAGCAACATCACTGATAAAATGTTTGAATATGGCAAGAATCTTGGTCTGTCCTTCCAAGTTGTGGATGACATTCTGGATTTTACGCAATCAGCCGAGCAGTTAGGAAAGCCTGCCGGCAGTGACCTTGCCAAAGGTAACCTGACCGCTCCAGTAATTTTTGCGCTTGAGAAAGAGCCGAATCTGAGAGATATCATTGATTCTGAATTCAGTGATCCTGGTTCCTTGGATGAGGCCATTGAATTGGTTAAGAGTTGTGGAGGGATTGAAAGAGCACAAGAGTTGGCTAAAGAGAAAGCTGATCTTGCTGTTCAAAATCTTCAGTGCCTTCCTCAGAGTAAATTTAGAGAAGCTCTTGAGGATATGGTGACATATAATCTTCAACGGATTGATTG 1253 0.4134 MMPVTSQSLDFGGKNLVACGCSSSTSFQRYTMRNYAKVNSGGWSRGQGDRKSVNCKRGTTQCRFSTIMKIAETTVNGGTQDSLDLKNYSRGLISPTKLFEVVADDLQTLNKNLKSIVGAENPVLMSAAEQIFGAGGKRMRPAMVFLVARATAELVGLKELTIKHRRLAEIIEMIHTASLIHDDVLDESNLRRGKETVHQVYGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIRQASGLFDCDLPLEEYLIKSYYKTASLIAASTKGAAIFSGTDSNITDKMFEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPNLRDIIDSEFSDPGSLDEAIELVKSCGGIERAQELAKEKADLAVQNLQCLPQSKFREALEDMVTYNLQRID 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01011 417 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5 417 - -
Bva09g01011 417 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 5 417 - -
Bva09g01011 417 Pfam Polyprenyl synthetase 123 368 IPR000092 GO:0008299
Bva09g01011 417 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 93 416 - -
Bva09g01011 417 SUPERFAMILY Terpenoid synthases 97 415 IPR008949 -
Bva09g01011 417 ProSitePatterns Polyprenyl synthases signature 2. 301 313 IPR033749 -
Bva09g01011 417 SFLD Isoprenoid Synthase Type I 128 412 - -
Bva09g01011 417 CDD Trans_IPPS_HT 119 415 IPR000092 GO:0008299
Bva09g01011 417 ProSitePatterns Polyprenyl synthases signature 1. 179 193 IPR033749 -
Bva09g01011 417 Gene3D Farnesyl Diphosphate Synthase 94 416 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01011 Bva-Chr9 5155103 5159064 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01011 K05356 - gmx:100783538 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01011 09 5155103 5159064 Bva09g01011 09 5155103 5159064 ECH