Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00985 atgcaaGCATCACTTTTATGCTCTTGTGATGGAAATGGAGAAAGATTTCTGAAAGTGCAACCAGACATCAATCTTGTTTCACTACGTTCATCAAGAGCTAAGTCACTTCCGATTTGGCTTTCTCACTCGAAATCATCTATCAAATCCACACTAAGGTCGAAGTCTAGTGTTTCTCCACTTCTCTGCTGGATTTCGTCGAATGGGTATAGTGCCAATGGTGGTCGGAGTCTTCGGGATTGGATAGAGCTGGCCGGTGAGTTCCTTTCAACTGCATTTCCCATATGGGTAACACTTGGGTGCTTGATTGGGTTGTTCGGTCCCAATTCCTTCAACTGGGTCACGCCCAAATTGAGCATTGCTGGCCTCACAATCATCATGCTAGGCATGGGGATGACACTTACCCTTGATGATCTTCGTGGTGCTCTTGCTATGCCTAAGCAAGTACTCGCTGGTTTTGTGCTTCAATATTCGGTGATGCCACTATCTGGTTTTCTAGTTAGGAAATTCTTAAGTTTTCCATCACATTATGCTGCAGGTTTAATATTAGTTGGTTGCTGCCCAGGTGGAACTGCGAGTAATATTGTTACTTATCTTGCACGTGGAAATGTGGCGCTTTCTTTGGTAATGACAGCTGCAAGCACTTTTTCTGCTGTGGTTGATCAACTTGCTGGTAAATATGTAGCTGTGGATGCAGCTGGATTACTGACATCAACGTTGCAGGTTGTGCTCTTACCTGTCTTGGCTGGTGCATTTCTAAACCAGTATTTTCAATCTCTTGTTAAATTTGTCTCTCCATTGATGCCACCCATGGCTGTGGCAACCGTGGCAATTTTATGCGGAAAAGCAATAGCCCAGAGTTCTTCAGCAATCCTCATGTCTGGTGGACAAGTGATTCTAGCTTGTTGCCTTCTTCATGCTTCtggatttttctttggttACATTCTTGCCAAAATTATTGGAATAGATGAGTCTTCGTCACGAACCATCTCCATCGAGGTCGGCATGCAGAACTCAGTGCTTGGAGTTATCCTTGCTAGTCAGCAATTTGGAAATCCCCTGACCACAGTACCCTGCGCAGTTTCTAGTGTTTGTCACTCAATCTTTGGTAGTGTTCTTGCAGGAATTTGGAGGCACTCTCCTCCTCCTGACAATAAAGACTG 1160 0.4379 MQASLLCSCDGNGERFLKVQPDINLVSLRSSRAKSLPIWLSHSKSSIKSTLRSKSSVSPLLCWISSNGYSANGGRSLRDWIELAGEFLSTAFPIWVTLGCLIGLFGPNSFNWVTPKLSIAGLTIIMLGMGMTLTLDDLRGALAMPKQVLAGFVLQYSVMPLSGFLVRKFLSFPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSLVMTAASTFSAVVDQLAGKYVAVDAAGLLTSTLQVVLLPVLAGAFLNQYFQSLVKFVSPLMPPMAVATVAILCGKAIAQSSSAILMSGGQVILACCLLHASGFFFGYILAKIIGIDESSSRTISIEVGMQNSVLGVILASQQFGNPLTTVPCAVSSVCHSIFGSVLAGIWRHSPPPDNKD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00985 386 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 54 385 - -
Bva09g00985 386 Pfam Sodium Bile acid symporter family 121 287 IPR002657 GO:0016020
Bva09g00985 386 PANTHER SODIUM-BILE ACID COTRANSPORTER 54 385 IPR004710 -
Bva09g00985 386 Gene3D - 77 379 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00985 Bva-Chr9 5072283 5075980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00985 40 386 Organic Solute Cotransporters AT1G78560 68.407 1.95e-174 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00985 K03453 - pvy:116128267 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00985 09 5072283 5075980 Bva09g00985 09 5072283 5075980 ECH