Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00980 ATGGCTGCGTATACCCCAAAGAATATCCTCATCACTGGGGCAGCTGGATTTATTGCATCCCATGTTGCCAACCGGCTTATCCGGAACTATCCAAACTACAAAATTGTTGTGCTTGACAAACTTGATTACTGTTCTAATCTGAAAAACCTCCTTCCTTCCAAATCATCTCCCAACTTCAAGTTTGTGAAGGGGGATATTGGAAGTGCTGACCTTGTCAACTACCTTCTGATTACTGAGTCCATTGACACAATAATGCACTTTGCTGCTCAGACCCACGTTGACAACTCCTTTGGCAATAGCTTTGAGTTCACCAAGAACAACATATATGGCACTCATGTCCTATTAGAAGCCTGCAAGGTCACTGGCCAGATCAGAAGGTTCATTCATGTGAGCACAGATGAGGTCTATGGTGAGACAGATGAGGATGCTGTTGTGGGAAACCATGAGGCTTCCCAACTTCTTCCAACAAACCCATACTCTGCAACAAAAGCTGGAGCAGAAATGCTTGTCATGGCATATGGTAGGTCATATGGGTTACCTGTGATCACAACACGTGGAAATAATGTTTATGGGCCAAATCAGTTTCCTGAGAAGTTGATTCCGAAGTTCATCCTCTTGGCTATGCAAGGCAAGGTTCTGCCCATTCACGGGGATGGTTCTAACGTGAGgagttatttatattgtgAAGATGTTGCAGAGGCTTTTGAAGTTATCCTTCACAAGGGGGAGGTTGGCCATGTTTATAATGTTGGGACTAAGAAGGAAAGGAGAGTTATTGATGTAGCTAAAGATATATGCAGACTTTTCTCAATGGATCCTGAGACAAGCATAAAATTTGTAGATAACAGACCGTTTAATGACCAGAGGTACTTCCTTGATGATCAAAAGCTGAAGGTCTTGGGTTGGTCTGAGAGGACCACATGGGAAGAGGGGTTGAAGAAAACCATGGAGTGGTATATCAAGAACCCTGATTGGTGGGGCGATGTCAGTGGAGCATTGCTTCCTCATCCAAGGATGCTGATGATGCCTGGTGGGATGGAGAGACATATTGATGGATCTGAAGATGAGAAACCTGCATCCTATGCCGCAAGCAATACTAAAATGGTGGTTCCGTCATCAAAGACAGCTGGCACTCAGCAGAAACATCCTTTCAAGTTCCTGATCTATGGTAGAACAGGGTGGATTGGGGGTCTGCTAGGGAAACTGTGTGAAAAACAAGGGATTCCATATGAATATGGAAAAGGGCGTCTTCAGGATCGCTCATCACTCATAGCAGATATACAGAGCGTGAAGCCAACCCATGTTTTTAATGCTGCAGGTGTGACTGGCAGACCAAATGTTGATTGGTGCGAATCTCATAAAACAGAGACAATACGCACCAATGTTGCTGGCACTTTAACCTTGGCTGATGTCTGCAGAGAGAATGGGCTCTTAATGATAAATTATGCCACTGGCTGTATATTTGAGTATGATGCTGCACATCCAGAGGATTCTGGCATTGGTTTTAAGGAGGAGGACAAACCCAATTTCACTGgttctttttattctaaaaccaAGGCCATGGTTGAAGAACTTTTGAAGGAATATGACAATGTGTGCACCCTCAGGGTTCGCATGCCAATTTCGTCTGACCTGAATAACCCACGCAACTTCATTACTAAGATTAGCCGATACAACAAAGTGGTTAATATTCCAAACAGCATGACTATCTTGGATGAACTTCTACCTATTTCCATTGAGATGGCAAAGCGAAATTTGAGGGGCATCTGGAACTTCACAAATCCTGGGGTTGTTAGCCACAACGAGATCCTCGAGATGTACAGGGATTACATTGACCCCAGCTTCAAATGGAACAACTTCACACTTGAAGAGCAAGCCAAGGTGATAGTTGCTCCACGAAGCAACAATGAGATGGATGCATCCAAGTTGAAGAAAGAGTTCCCAGAGTTGCTTCCCATTAAGGAATCACTGATCAAGTATGTCtttgaaccaaacaagaaAACTGGTAAAAAGTA 2015 0.4293 MAAYTPKNILITGAAGFIASHVANRLIRNYPNYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKVLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNVGTKKERRVIDVAKDICRLFSMDPETSIKFVDNRPFNDQRYFLDDQKLKVLGWSERTTWEEGLKKTMEWYIKNPDWWGDVSGALLPHPRMLMMPGGMERHIDGSEDEKPASYAASNTKMVVPSSKTAGTQQKHPFKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLQDRSSLIADIQSVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCRENGLLMINYATGCIFEYDAAHPEDSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYRDYIDPSFKWNNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLPIKESLIKYVFEPNKKTGKK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00980 671 Pfam RmlD substrate binding domain 385 555 IPR029903 -
Bva09g00980 671 Gene3D - 9 313 - -
Bva09g00980 671 CDD dTDP_GD_SDR_e 7 324 IPR005888 GO:0008460|GO:0009225
Bva09g00980 671 Gene3D - 374 671 - -
Bva09g00980 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 332 IPR036291 -
Bva09g00980 671 PANTHER UDP-GLUCOSE 4,6-DEHYDRATASE 1 667 - -
Bva09g00980 671 Gene3D - 200 322 - -
Bva09g00980 671 CDD dTDP_HR_like_SDR_e 385 657 - -
Bva09g00980 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 380 660 IPR036291 -
Bva09g00980 671 Pfam GDP-mannose 4,6 dehydratase 10 315 IPR016040 -
Bva09g00980 671 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00980 Bva-Chr9 5044447 5048128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00980 8 320 Miscellaneous Gene Families AT4G00110 26.866 1.55e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00980 K12450 - gmx:100803187 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00980 09 5044447 5048128 Bva09g00980 09 5044447 5048128 ECH