Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00976 ATGAGATGCAATGCATGCTGGCGAGAACTAGAAGGGCGAGCGGTTGCCACAACATGCGGTCACCTTTTATGTGCCGACGATGCCAATAAGATATTAAGTAATGATGGAGCATGTCCCATATGCGATCAAGCGCTTTCAAAGAGTCTCTTGAAACCAGTCGATATCAATCCTAATGATGAATGCACAAACATGGCCATGGCTGGAGTATCTCCTCAGATATTGATGAAAAGTGCATATAGGAGCGTGATGTTCTACATTGGGCAGAAAGAACTGGAGATGCAGTTTAAACTGAACAAGGTTGTAGCTCAATGCCGGCAGAAATGTGAGATGTTGCAGGAGAAGTTTTTGGAAAAACTAGAGCAGGTGCATACTGCGTACCAAAAGATGGCCAAGAAATGCCAGATTATGGAACAGGAAATAGAGAGTTTGTCCAAGGATAAGCAAGAACTCCAGGAcaaattttctgaaaaagcCAGgcagaagagaaaattagaTGAAATGTATGACCAGTTGAGGAGCGAGTTTGAGTCAATGAAACGATCTGCCACACAGCCTGCAAGCAACTTTTATCCCAGAAATGAGCCTGATTTATTCTCCAATCCACCCAACATGATGGACGACAGAGATTCTGGCAGAAAAGGTCGACCGATTTTCGCTCCTGACACTCCAGGACCAAGAGAGGATACATGGCCAAGACAGAATAGCTCGAACTCAGATCACTTTGATATCTCTTGTGGCTCACCTCTAAAACAAGCATCCTTTCCAATGAACGCTGGGAACAGAAGGGTTGGTGCTCACCCTCTGTTTGGAGCCGGCGTTGCCAGTAACCCATCAATGACTTTAAGGAACATGATGATGTCTCCAATAAAACGGCCTCAGCTTGCACGCAATCGCCCTCAAATATTCACGTAATTCCGAGTCATCATGCACTTGGTGTTTCAGGTTGTAGGCTGAGGAAGCCATCTACTATATCTCTCAAGCTTGTATGGTtttgttctcttcttttttccttgttcttttcattttgaaaggggaaaagaaaagaatttgaagttcGTGGCCATGAATCAGTAGTCCTCATAATGTTCTATAATATTCTTATCTTCATAACTTCGGCTTCCTTTCATGACCTCCAAACTAAGAGCTGCTAACAAAAACAAGTTTTGGATATAAGATGTATTACTTTTGTTACTTCGCTACATTCTGCAGATAGACAATCGTGTATTAAATAGTGAGAAATGAAAAGTGGATGAGCTTTCAGCTTCCTGAACCCTTGAAACTAACTATTGTTATATTGAGCTTTTGAACTCAATATTTCATAACAGAT 1327 0.3949 MRCNACWRELEGRAVATTCGHLLCADDANKILSNDGACPICDQALSKSLLKPVDINPNDECTNMAMAGVSPQILMKSAYRSVMFYIGQKELEMQFKLNKVVAQCRQKCEMLQEKFLEKLEQVHTAYQKMAKKCQIMEQEIESLSKDKQELQDKFSEKARQKRKLDEMYDQLRSEFESMKRSATQPASNFYPRNEPDLFSNPPNMMDDRDSGRKGRPIFAPDTPGPREDTWPRQNSSNSDHFDISCGSPLKQASFPMNAGNRRVGAHPLFGAGVASNPSMTLRNMMMSPIKRPQLARNRPQIFTFRVIMHLVFQVVGGSHLLYLSSLYGFVLFFFPCSFHFERGKEKNLKFVAMNQSSCSIIFLSSLRLPFMTSKLRAANKNKFWIDVLLLLLRYILQIDNRVLNSEKKVDELSASTLETNYCYIELLNSIFHN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00976 433 SUPERFAMILY RING/U-box 2 53 - -
Bva09g00976 433 Pfam zinc-RING finger domain 2 43 IPR001841 -
Bva09g00976 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Bva09g00976 433 MobiDBLite consensus disorder prediction 179 239 - -
Bva09g00976 433 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG 1 303 - -
Bva09g00976 433 Coils Coil 126 181 - -
Bva09g00976 433 MobiDBLite consensus disorder prediction 179 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00976 Bva-Chr9 5017848 5021222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00976 K10639 - gmx:100101885 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00976 09 5017848 5021222 Bva09g00976 09 5017848 5021222 ECH