Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00946 ATGGGAGGTGGATTTAGAGTGCTTCACCTTGTTAGGCCGTTTCTCTCATTTCTGCCAGAAGTTCAGTCTGCTGACAGAAAAATCCCATTTAGGGAGAAGGTCATATATACTGTGatctctctcttcattttcctgGTTTGTAGTCAGCTCCCTCTGTATGGAATACACTCAACTACAGGTGCAGATCCATTCTACTGGATGCGGGTTATCCTTGCTTCAAATCGTGGAACAGTTATGGAGCTTGGAATCACCCCAATTGTGACTTCTGGACTGGTGATGCAACTTCTGGCTGGGTCAAAGATCATTGAAGTGGACAACAATGTACGTGAGGATCGTGCCCTCTTaAATGGAGCACAGAAACTACTTGGCATCTTGATTGCTATTGGAGAGGCAGTTGCCTATGTTCTTTCTGGAATGTATGGTAGTGTGGGCCAACTTGGAGTGGGAAATGCCATCCTCATCATTATTCAGCTGTGCTTTGCTGGTATCATTGTAATATGTTTAGATGAGCTTCTCCAGAAAGGATATGGTCTGGGATCTGGAATTTCCTTATTTATAGCGACCAATATCTGTGAAAGCATTATCTGGAAGGCGTTTAGTCCCACCACCATAAACAGTGGTCGAGGAGCAGAGTTTGAGGGTGCTGTTATTGCTCTATTCCATTTATTGATAACTAGAACAGACAAGGTCCGTGCTCTTCGTGAGGCATTTTACCGGCAGAACCTTCCCAACGTGACAAATCTGCTTGCTACTGTTTTGATCTTCCTCATTGTGATATACTTCCAAGGTTTCCGTGTTGTTTTGCCTGTAAGATCAAAGAATGCCCGTGGACAGCAAGGCTCCTATCCAATTAAACTGTTTTATACCTCCAACATGCCTATTATTCTTCAGTCTGCCCTTGTTTCCAATCTCTACTTTATCTCTCAGTTGCTCCACCGAAAGTACAGTGGAAACTTCTTCGTAAATCTGTTGGGCAAATGGAAGGAATCAGAATATGGAGGCCAGTCTGTTCCTGTTGGTGGTATTGCATACTACATCACTGCACCATCCAGCTTAGCTGATATGGCAGCCAATCCTTTCCATGCATTGTTCTATCTTGTGTTTATGTTGTCAGCATGTGCCTTGTTCTCTAAAACTTGGATTGAAGTCTCCGGATCATCAGCCAGAGATGTTGCCAAGCAGTTGAAgGAACAACAAATGGTGATGCCTGGGCACCGTGAATCAAACTTACAGAAAGAGCTGAACCGATACATTCCCACCGCAGCAGCATTTGGAGGCATTTGTATTGGTGCACTGACAGTGTTGGCAGATTTCATGGGTGCAATTGGTTCAGGGACAGGGATACTACTCGCCGTAACGATCATCTATCAGTACTTTGAGACATTTGAGAAGGAGCGAGCCAGTGAGCTTGGCTTCTTTGGTTTTTG 1427 0.4373 MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVNLLGKWKESEYGGQSVPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00946 475 Gene3D SecY subunit domain 9 473 IPR023201 -
Bva09g00946 475 Pfam SecY 77 458 IPR002208 GO:0015031|GO:0016020
Bva09g00946 475 PANTHER F9K20.24 PROTEIN 1 475 - -
Bva09g00946 475 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 31 466 IPR002208 GO:0015031|GO:0016020
Bva09g00946 475 PIRSF SecY_Sec61alpha 8 470 IPR002208 GO:0015031|GO:0016020
Bva09g00946 475 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 475 IPR002208 GO:0015031|GO:0016020
Bva09g00946 475 Pfam Plug domain of Sec61p 42 76 IPR019561 -
Bva09g00946 475 SUPERFAMILY Preprotein translocase SecY subunit 10 465 IPR023201 -
Bva09g00946 475 ProSitePatterns Protein secY signature 1. 77 96 IPR030659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00946 Bva-Chr9 4861967 4865961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00946 1 475 Miscellaneous Gene Families AT2G34250 94.105 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00946 K10956 - gmx:100809703 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00946 09 4861967 4865961 Bva09g00946 09 4861967 4865961 ECH