Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00929 ATGTCCAGCAAAGGAAAAGATGTAGCAGAAGGATCGTCAACAAGATCCTCTGCTCCTGCTGCTGCtgatcatcatcatcagctgcagcagcagcagccgccgcagcaacagcaacagcaGCCGCTGCCGCTGAGCCGGTACGAGTCTCAGAAGAGAAGGGATTGGAACACTTTTGGGCAATACTTGAGGAATCAAAGGCCTCCGGTGGCGCTTTCACAGTGCAATTCAAGCCATGTTCTTGATTTCCTTAGGTACTTAGATCAGTTTGGGAAAACTAAGGTGCACTTACAAGGATGTTTGTTCTTTGGGCAAACTGAGCCACCTGGTCCTTGCACTTGCCCCCTTAGACAAGCTTGGGGGAGCCTTGATGCACTCATCGGCAGGCTTCGAGCTGCTTATGAAGAAAACGGTGGCTTGCCGGAGACCAATCCGTTTGCCAGTGGCACCATACGCATTTATCTTCGCGAGGTGAGGGATTCTCAAGCCAAGGCAAGAGGAATTCCttataagaagaagaagaagaggagccTAATCAAGACAGTTAACGGGAATGCCTCAAACTTACCTATGCAGTA 575 0.4296 MSSKGKDVAEGSSTRSSAPAAADHHHQLQQQQPPQQQQQQPLPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSSHVLDFLRYLDQFGKTKVHLQGCLFFGQTEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGLPETNPFASGTIRIYLREVRDSQAKARGIPYKKKKKRSLIKTVNGNASNLPMQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00929 191 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Bva09g00929 191 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-LIKE 2 191 - -
Bva09g00929 191 MobiDBLite consensus disorder prediction 1 46 - -
Bva09g00929 191 MobiDBLite consensus disorder prediction 1 49 - -
Bva09g00929 191 PANTHER PROTEIN G1-LIKE2 2 191 IPR040222 -
Bva09g00929 191 Pfam ALOG domain 36 159 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00929 Bva-Chr9 4787595 4790271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00929 - - cit:102620640 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00929 09 4787595 4790271 Bva07g01663 07 15743178 15745736 ECH
Bva09g00710 09 3629088 3632784 Bva09g00929 09 4787595 4790271 ECH
Bva07g01911 07 17067701 17070560 Bva09g00929 09 4787595 4790271 ECH
Bva09g00929 09 4787595 4790271 Bva09g00929 09 4787595 4790271 ECH