Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00908 ATGGCTCTCTCCACCCGTCTCactctcttcctcttcctttcaTTTATGTTCCTCTGCGGTCAAACCCGTGGTCGCTTCGTCAGCAACCTTTTATCtgcttcttcatcttcctctgATCTGGTCTCTGATGGGGTGCATGATTCCCGGAAGCCATCCGAGAGCTTGCTGCTGATCCACCGTCCATTTGGGTTCCTGTCAGAATCTACTTGCGAGCAGACTTATGGATTTttgccatgcaccaccactgTGCTTGGAAACTTGTTCCTCATCATCATTTATGGCTTCCTCATGTACAAGGCTGCTACCTACTTGTCCAATGGGAGTGAGCTGCTGCTTGAGATATTGGGGCCTGGTATTGTTGGTGGGTTGTTCCTTCCCATTCTGGGTGCGCTGCCAGACGCCATGCTCATTCTCGTGTCTGGGCTTTCTGGCAGTAAAGAAACTGCTCAGAGTCAAGTCTCTGTTGGAATGGGTTTGCTAGCTGGGTCAACAACTCTTCTTTTGACCATAATATGGGGAGTCTGCGTAATTGTTGGCAAGTGCGACCTCGACGATAGAATTGCAGTGGACACACAAGACACAAGGGGGTATAGTTTAACTGGTTCTGGAGTCAGTACTGATATTTGGACAAGTTATGCTGCTAGGATTATGGTTATATCAGTCCTTCCATTTTTGATAGTTCAATTACCGCAAATTCTCAATTCAACTTCTGGAAGGCACTTGGCTGTTTTGATTGCGCTTATTGTCTCTCTTGCTTTGCTGATTGTTTATTGCCTGTATcagATTTTCCAACCTTGGATACAGAGGAGAAAGCTTGCTTATGTGAAACACAAACACGTTATATTTGGAATTTTGAGACATTTTGAGCATGCATTAGGAAGGTTTCTGAAAGAGGATGGTCAACCTGACAAAGAAATGataaagaagctttttaaaacaattgatGAGAATGGAGATGGGGAACTATCTCATGGTGAATTGAAAGCACTAATGGTTGGAATTAACTTTGAGGAGATTGACCTGAATCATGACGATGCTGTGTTCAAAATAATGGCTGAATTTGACACCTCTCATAATGATGCTGTTGATGAAGATGAGTTTGTAGATGGCATCTGCAAATGGATTAGAAATGCTCAGGGTCATTCTCGAGGTGTTTCCGGTTCTCAGCCGACGAGATTTTTACAAGATTTTCACCAAGAAACAAAGAGGGAACATGATCTATTGGATGTCGGGGATCAGAGTGATGAAGTTGTTGAGGGTGTTGCAGATCCCAAATGGACTTCCATCAAAGCAgtgttgctgctgctgttggGAACGGTTATTGCCGCTGCCTTTGCTGACCCTCTGGTTGATGCAGTTGATAACTTTTCTGATGCCACAAGCATTCCcgctttcttcatttccttcattGCACTTCCTTTCGCTACCAATTCAAGTGAAGCAGTGTCAGCAATTATATTTGCTAGTCGTGATAAGAGGCAGACAGCCTCCTTAACTTTCTCCGAGCTATATGGTGCTGTTACGATGAACAATGTGCTTTGCCTGTCAGTGTTTTTGGCCCTTGTTTATGTGAGAGGATTGACATGGGACTTCTCTTCAGAAGTATTAGTTATTCTGGTTGTTTGCCTTGTCATGGGTCTGTTTGGCAGTTTCCGGACTCACTTCCCTCTCTGGACATCTATACTGGCTATCCTGCTTTATCCCTTCTCCCTGGCATTGGTCTATGTTCTTGATTATGTATTTGGATGGTCATA 1754 0.4094 MALSTRLTLFLFLSFMFLCGQTRGRFVSNLLSASSSSSDLVSDGVHDSRKPSESLLLIHRPFGFLSESTCEQTYGFLPCTTTVLGNLFLIIIYGFLMYKAATYLSNGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKETAQSQVSVGMGLLAGSTTLLLTIIWGVCVIVGKCDLDDRIAVDTQDTRGYSLTGSGVSTDIWTSYAARIMVISVLPFLIVQLPQILNSTSGRHLAVLIALIVSLALLIVYCLYQIFQPWIQRRKLAYVKHKHVIFGILRHFEHALGRFLKEDGQPDKEMIKKLFKTIDENGDGELSHGELKALMVGINFEEIDLNHDDAVFKIMAEFDTSHNDAVDEDEFVDGICKWIRNAQGHSRGVSGSQPTRFLQDFHQETKREHDLLDVGDQSDEVVEGVADPKWTSIKAVLLLLLGTVIAAAFADPLVDAVDNFSDATSIPAFFISFIALPFATNSSEAVSAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILVVCLVMGLFGSFRTHFPLWTSILAILLYPFSLALVYVLDYVFGWS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00908 584 SMART efh_1 306 334 IPR002048 GO:0005509
Bva09g00908 584 SMART efh_1 346 374 IPR002048 GO:0005509
Bva09g00908 584 Gene3D - 420 577 IPR044880 -
Bva09g00908 584 Gene3D - 116 275 IPR044880 -
Bva09g00908 584 ProSitePatterns EF-hand calcium-binding domain. 315 327 IPR018247 -
Bva09g00908 584 ProSiteProfiles EF-hand calcium-binding domain profile. 302 337 IPR002048 GO:0005509
Bva09g00908 584 CDD EFh 306 371 IPR002048 GO:0005509
Bva09g00908 584 Pfam EF-hand domain pair 305 369 IPR002048 GO:0005509
Bva09g00908 584 Pfam Sodium/calcium exchanger protein 431 575 IPR004837 GO:0016021|GO:0055085
Bva09g00908 584 Pfam Sodium/calcium exchanger protein 88 264 IPR004837 GO:0016021|GO:0055085
Bva09g00908 584 Gene3D - 276 386 - -
Bva09g00908 584 SUPERFAMILY EF-hand 299 509 IPR011992 -
Bva09g00908 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 581 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva09g00908 584 PANTHER SODIUM/CALCIUM EXCHANGER NCL 16 581 - -
Bva09g00908 584 ProSitePatterns EF-hand calcium-binding domain. 355 367 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00908 Bva-Chr9 4678552 4682283 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00908 28 584 EF-hand Containing Proteins AT1G53210 66.726 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00908 - - adu:107459761 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00908 09 4678552 4682283 Bva09g00908 09 4678552 4682283 ECH