Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00904 ATGAGAGACATTTCAAGAGCAGTGTGCttcacttttattctttttctagttttaGTATTCAAGGTTGAAGGTCGTTTTCTAAGAAGCAATATTTCTGATGAAATGTTAGTTTCAGATGGAGTTGATGATGGTGTTCAGCCAAACCAAGATAATTCTTACCTGCTTCTCAAAGGGATTGAACCTTCTGAGAAGCAGTGTGAAGAAATGTTCGGCTTCGTTCTATGTTCAAGCAGCATTTATGGTCTTTTAACCCTAATCTTCTTTTACGAGTTCATGTTGTTCCAAGGAGAGTCGTATTTGGCTGCTGGAAGTAAGCAAATCTTCGAAATTCTTGGCCCTGGTGTCTTCGGTTCAAGTGCTTTTGATATTCTTGGAGCTCTTCCAGAGTCCATAGTGTTTGTTGCTTCTGGACTTTCTGGCAACAAGGAGGTCGCACAAGAGTATGCCCAAACTGGTGTTGGCTTATTGGCTGGATCATCCATCTTCCTTCTGACACTTGTTTGGGGAGTTTGTGTCTTCCGAGGCAGCCAAGAACTCACGAATGATTCAATGTCTAAAAGGGTTAATGGATCAAAATGGTCATTTGCAAACCTGAAGGCTTTCTTAACTGATTTTGGCATTACAAGAAATGTGGCGACAAGAAACATTGCAAAATTCATGATTCTCTCAGTCACACCTCCATTGATAATGCAGATCCCTAATGTATTCCAATTCTCTTCTGTGCAACGTACCACGACCTTGATGATTGCTCTCATGGTTGCTATTCTTCTTCTAGTCTCATATGTGATTTACCAGATCTTTGAACCtcatatacataaaattataagactaAAATATGTGGAACACGATTACTTGATATCGAGAATTCTACAACAAGCTCCAAAGCATACCCTTCAAAGCATCCTCACTGAGAACGGGACTCCCGATGAAAATTCCATGAAGATAATTTTTGAGTTCTTGGACAAAAATAGAGATGGCGAAATATCACGTTCTGAATTAAAGGAGTTGCTGCTTACAACCAGATCAACTGAAACAAATaccaatgaagagaatgaAGTAGAACAATTGTTCAGAAATTTTGACAGGAATGGTGATGGAAAATTAAGCTATGAGGAATTCGTGAATGGCTTCAAAACATGGTTTGACCAAACAAAGCAGGCTATGGTGAGACAATTCCTCACAAGAAAAGCCCTGAAGAGAATACATGAGGTTTTCATGCCATCCCTTcaaaacataagaaataaacacaatctgaagaaaattgaatcaGACATCTTAAGTCAAGTCACTGCAGAAGATAGAACAGCCATTGAAAGGTTTTTTGGGAAACTTGATATCAATGGAGATGGCTGCATTTCGCAATCTGAGTTGAAAGAACTAGTCAAGAACATCAGTCCTGGTTTGGATTCATCGGATGTGGAggaattaactaaaaaaatcattacacTACTTGACAGTGATAATAATGGAAAAATTAGTTTGGAGGAATTTGTTAATGGGATTGAAAAATGGCATAATGAATCCTCCAATTCAGTGTCTCATGGACAAAATCTTCGAGCCTTTAATGGTATTGAAAATTTGGTGAGAGAGAGGCACGGCAAAGGAGTAGTTTTGCGGGTCAAGGGCATAATCAAGGCTTTAATGAATGTGGCGCTGGGATTTGCGATGTTATATTTCTTTGCAGAGCCGTTAATATCAAGTGTCCAGAAATTATCTGAACATGCAGGAATCCCATCTTTGATCATCTCATTTGTTTTAGTCCCACTGGCTATAAATGGCAGAGAAGCAGCTTTTGCAGTCAATGAAGCTAGCCATAAGAATTCTGAAACAATTTACGAGATTTATGATGCTGTCTCCATGAACAACATTCTTGGCTTTCTTGCAATCTCGGTTCTGATATTTCTGCGAGGAGTCACTTGGGAATTTTCCGCTGAACTACTGGTTGTGGCACTTGTTTGTCCTGTAATGGGAGTTGCTGCAATCTTCTGCTCCAAATTCCCTCTATGGACCTCCATCTTGGGATGCCTCCTATATCCATTATCTTtgagtttgatttttgttGTGAATGATGTTCTGAATTATGTTTA 2087 0.3718 MRDISRAVCFTFILFLVLVFKVEGRFLRSNISDEMLVSDGVDDGVQPNQDNSYLLLKGIEPSEKQCEEMFGFVLCSSSIYGLLTLIFFYEFMLFQGESYLAAGSKQIFEILGPGVFGSSAFDILGALPESIVFVASGLSGNKEVAQEYAQTGVGLLAGSSIFLLTLVWGVCVFRGSQELTNDSMSKRVNGSKWSFANLKAFLTDFGITRNVATRNIAKFMILSVTPPLIMQIPNVFQFSSVQRTTTLMIALMVAILLLVSYVIYQIFEPHIHKIIRLKYVEHDYLISRILQQAPKHTLQSILTENGTPDENSMKIIFEFLDKNRDGEISRSELKELLLTTRSTETNTNEENEVEQLFRNFDRNGDGKLSYEEFVNGFKTWFDQTKQAMVRQFLTRKALKRIHEVFMPSLQNIRNKHNLKKIESDILSQVTAEDRTAIERFFGKLDINGDGCISQSELKELVKNISPGLDSSDVEELTKKIITLLDSDNNGKISLEEFVNGIEKWHNESSNSVSHGQNLRAFNGIENLVRERHGKGVVLRVKGIIKALMNVALGFAMLYFFAEPLISSVQKLSEHAGIPSLIISFVLVPLAINGREAAFAVNEASHKNSETIYEIYDAVSMNNILGFLAISVLIFLRGVTWEFSAELLVVALVCPVMGVAAIFCSKFPLWTSILGCLLYPLSLSLIFVVNDVLNYV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00904 695 CDD EFh 437 501 IPR002048 GO:0005509
Bva09g00904 695 Pfam EF-hand domain pair 435 499 IPR002048 GO:0005509
Bva09g00904 695 Pfam EF-hand domain pair 312 377 IPR002048 GO:0005509
Bva09g00904 695 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 420 524 - -
Bva09g00904 695 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 548 694 - -
Bva09g00904 695 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Bva09g00904 695 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Bva09g00904 695 Gene3D - 274 378 - -
Bva09g00904 695 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 420 524 - -
Bva09g00904 695 SUPERFAMILY EF-hand 312 504 IPR011992 -
Bva09g00904 695 Pfam Sodium/calcium exchanger protein 550 685 IPR004837 GO:0016021|GO:0055085
Bva09g00904 695 Gene3D - 381 517 - -
Bva09g00904 695 ProSitePatterns EF-hand calcium-binding domain. 361 373 IPR018247 -
Bva09g00904 695 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 9 405 - -
Bva09g00904 695 SMART efh_1 476 504 IPR002048 GO:0005509
Bva09g00904 695 SMART efh_1 352 380 IPR002048 GO:0005509
Bva09g00904 695 SMART efh_1 312 340 IPR002048 GO:0005509
Bva09g00904 695 SMART efh_1 436 464 IPR002048 GO:0005509
Bva09g00904 695 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Bva09g00904 695 ProSiteProfiles EF-hand calcium-binding domain profile. 348 383 IPR002048 GO:0005509
Bva09g00904 695 CDD EFh 316 378 IPR002048 GO:0005509
Bva09g00904 695 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 9 405 - -
Bva09g00904 695 ProSiteProfiles EF-hand calcium-binding domain profile. 308 343 IPR002048 GO:0005509
Bva09g00904 695 ProSitePatterns EF-hand calcium-binding domain. 321 333 IPR018247 -
Bva09g00904 695 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 548 694 - -
Bva09g00904 695 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00904 Bva-Chr9 4661459 4665033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00904 401 689 EF-hand Containing Proteins AT1G53210 32.000 1.59e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00904 - - gmx:100798009 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00904 09 4661459 4665033 Bva09g00904 09 4661459 4665033 ECH