Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00901 ATGGAGAAACACAGCCACTCCCTCCCCAAGGTTGTAGGCGACGGTGAACCGCTCTACCTCTCCGGCTTCGGCAATCACTTCTCCTCTGAGGCCGTCCCCGGAGCTCTGCCACCTGACCAGAACAGCCCGCTTATCTGCCCCTACGGCCTCTATGCCGAGCAACTCTCCGGCACCTCCTTCACCTCCCCTCGCAAGCTTAACCTTCGCAGTTGGCTGTATCGGATCAAACCGTCGGTGACCCACGAACCGTTTAAGCTCCGGGTCCCATCAAATGGGAAGCTTTTGAGTGAGTTCAGTCAAGCCAACAGCTCTGCTAACCCAACACAACTACGTTGGAAACCCGTGGATGTACCCGAATCTCCAGTGGATTTTATTGATGGGTTGTACACGATATGTGGTGCTGGCAGCTCATTCCTGCGCCACGGATACGCTGTTCacatGTACACTGCCAACAAATCAATGGATAATTGTGCCTTTTGTAATGCCGATGGTGACTTCTTGATAGTTCCCCAAAAAGGAAGGCTGTGGATCACAACTGAATGTGGAAAGCTGAATGTTTCCCCTGGAGAAATTGTTGTATTACCTCAAGGGTTCCGTTTTGCTGTTGATCTGCCTGATGGTCCTTCCCGGGGCTATGTCGCTGAGATTTTTGGTACTCATTTTCAACTTCCTGATCTTGGACCAATAGGTGCTAATGGTCTTGCTGCTCCAAGGGATTTCCTTACTCCCACGGCATGGTTTGAAGACATTACCCGTCCTGGGTACACCATAGTACAAAAATTTGGCGGTGAACTGTTCACTGCGGTACAAGATTTCTCCCCCTTCAATGTTGTTGCTTGGCATGGAAACTATGTTCCATATAAGTATAATTTAAGCAAATTCTGCCCTTACAACACTGTTCTGATTGATCATGGTGATCCCTCAATAAATACTGTGTTGACGGCGCCAACTGATAAACCTGGTGTGGCATTGCttgattttgtcattttcccACCCAGATGGTTGGTTGCTGAGCATACCTTCCGGCCACCTTATTACCACCGCAACTGTATGAGTGAATTCATGGGCCTCATTCATGGTAGCTACGAGGCAAAGGCTGCTGATGCATTTCTTCCTGGTGGTGCTAGTCTTCACAACTGCATGTCTCCCCATGGTCCTGATACCCAATCTTATGAGGCTACCATTGCTCGTGGGAATGATGCTGGACCAACAAAGCTCGCAGGCACAATGGCTTTCATGTTTGAGTCAAGTTTGATACCTCGGATTTGTCAATGGGCTCTTGAATCTCCATTCATGGATCATGATTACTATCAGTGTTGGATTGGCCTGAGATCTCATTTTACAGTGAAGGAGACTTGTCCAGAAAGTGCAAGCAATGAGAATGGACATAGAGAGACAGGAAATGGTAGTTTAATGTTATCGAATGAATG 1430 0.4748 MEKHSHSLPKVVGDGEPLYLSGFGNHFSSEAVPGALPPDQNSPLICPYGLYAEQLSGTSFTSPRKLNLRSWLYRIKPSVTHEPFKLRVPSNGKLLSEFSQANSSANPTQLRWKPVDVPESPVDFIDGLYTICGAGSSFLRHGYAVHMYTANKSMDNCAFCNADGDFLIVPQKGRLWITTECGKLNVSPGEIVVLPQGFRFAVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLTPTAWFEDITRPGYTIVQKFGGELFTAVQDFSPFNVVAWHGNYVPYKYNLSKFCPYNTVLIDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGSYEAKAADAFLPGGASLHNCMSPHGPDTQSYEATIARGNDAGPTKLAGTMAFMFESSLIPRICQWALESPFMDHDYYQCWIGLRSHFTVKETCPESASNENGHRETGNGSLMLSNE 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00901 476 Pfam Homogentisate 1,2-dioxygenase N-terminal 19 291 IPR046452 -
Bva09g00901 476 Gene3D Jelly Rolls 280 418 IPR014710 -
Bva09g00901 476 MobiDBLite consensus disorder prediction 454 476 - -
Bva09g00901 476 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 19 449 - -
Bva09g00901 476 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 19 449 IPR005708 GO:0004411|GO:0006559|GO:0006570
Bva09g00901 476 SUPERFAMILY RmlC-like cupins 18 448 IPR011051 -
Bva09g00901 476 TIGRFAM hmgA: homogentisate 1,2-dioxygenase 19 447 IPR005708 GO:0004411|GO:0006559|GO:0006570
Bva09g00901 476 CDD cupin_HGO_N 110 218 - -
Bva09g00901 476 Pfam Homogentisate 1,2-dioxygenase C-terminal 292 447 IPR046451 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00901 K00451 - gmx:100801346 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00901 09 4648083 4651835 Bva09g00901 09 4648083 4651835 ECH