Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00876 ATGGCGGAGATCAAGATCATCGGAGTCCTGGGTAGCGGTCAAATGGGCTCCGGAATCGCCCAAATAGCCGCCATGCACGGCATCGACGTCTACCTTCTCGACACTGATCCTCAAGCTCTTTCTAGAGCCACCGATTCAATCTCTGCATCCATCCGCCGTCTCGTTTCTAGAGGACACCTCTCTCAAGCAGCAGGTACTGATGCTATGAGGCATTTGCGGTGCACCTCAAATTTGGAAGAGCTTCATCAGGCTGATTTTGTTATTGAAGCCATTGTAGAATCTGAAGATGTTAAGAAAACTTTATTTCTCCAACTAGACAAAATTACTAAGAGTTCAGCTATTTTGGCATCTAACACAAGTTCTATCTCTATCACCCGTCTGGCATCTTCAACTAGAAGGCCACACCAGGTTATTGGAATGCATTTTATGAATCCACCTCCTATTATGAAACTGGTTGAGATTGTGAAAGGCGCTGACACATCGGATGAGACATTTGCTGCTACAAAAGCATTGGCAGAGAGGCTGGGCAAGACAGTCATTACTTCCCAGGACTATTCAGGCTTCATTGTAAATCGAATCCTTATGCCTATGATAAATGAAGCATTTTTCACTCTCTATACTGGTGTTGCAACAAAAGAGGACATCGATAAAGGGATGAAGCTGGGAACCAATCATCCAATGGGTCCTTTGGAGCTGGCAGATTTCATTGGATTGGATGTGTGCTTGTCGATAATGAAAGTTCTTCATGCTGGCCTTGGGGATAACAAATATGCACCATGCCCCCTGCTTGTGCAGTATGTTGATGCTGGCCGACTTGGAAGAAAACGAGGTATTGGGATTTATGACTACCGCAAGGTGCCAAAATCAGCAAAGTTAGATTCTCGTCTCTA 890 0.4494 MAEIKIIGVLGSGQMGSGIAQIAAMHGIDVYLLDTDPQALSRATDSISASIRRLVSRGHLSQAAGTDAMRHLRCTSNLEELHQADFVIEAIVESEDVKKTLFLQLDKITKSSAILASNTSSISITRLASSTRRPHQVIGMHFMNPPPIMKLVEIVKGADTSDETFAATKALAERLGKTVITSQDYSGFIVNRILMPMINEAFFTLYTGVATKEDIDKGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDNKYAPCPLLVQYVDAGRLGRKRGIGIYDYRKVPKSAKLDSRL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00876 296 Gene3D - 190 295 IPR013328 GO:0016491
Bva09g00876 296 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 3 288 - -
Bva09g00876 296 Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 IPR006176 GO:0006631|GO:0070403
Bva09g00876 296 PIRSF HCDH 1 295 IPR022694 GO:0006631|GO:0016616|GO:0070403
Bva09g00876 296 Gene3D - 2 189 - -
Bva09g00876 296 ProSitePatterns 3-hydroxyacyl-CoA dehydrogenase signature. 184 209 IPR006180 GO:0006631|GO:0016491|GO:0016616
Bva09g00876 296 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 3 288 - -
Bva09g00876 296 Pfam 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 IPR006108 GO:0006631|GO:0016491|GO:0016616
Bva09g00876 296 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 187 285 IPR008927 -
Bva09g00876 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 185 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00876 Bva-Chr9 4516348 4518760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00876 62 296 Acyl Lipid Metabolism Gene Families AT3G15290 79.574 4.58e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00876 K00074 - zju:107416471 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00876 09 4516348 4518760 Bva09g00876 09 4516348 4518760 ECH