Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00875 ATGGCTTCACACGGCACTGTAACACCGTCCACACCTCTACTGGAGGCAAGAGGTGATGGGCATGGAGGGCAAGTCACGAGAGGTGGTGGCTGGTGGAACAAAGTTTTGGACATGGTCGAGGTTAAGATTCAACTCCATATCGCAGTACCGATGGTTCTTACCAATTTGTTCTATTACCTCATCCCTTTAGTTGCTGTCATGTTCGCCGGCCACCTTGGTGAAGTTCAGCTTGCCGGCTCTAGCCTCGGAAATTCATGGAACGTTGTCACTGGCCAGGGGATCGCGGTTGGGTTGAGTGGAGCACTGGAGACACTCTGTGGGCAAGCATTTGGGTCAGGAGATTATAGAATGTTAGGGGTGTATATGCAATCTGGTTGCATCatatcctttctcttttgtattGTCATATCCGTCATCTGGTTCTTTACTGAACCTATCCTAATCTTCCTTCATCAATCTCATTCTACTGCAAAAGCAACTGCTGTCTATATGAAGTATCTCATCCCGGGAATATTTGCATATGCCTTCATGCAAAACTTATTGAGGTTTCTTCAAACGCAATCTATTGTAGCTCCATTAATTATCCTCTCGGGCCTGCCACTATTGATTCATATTGGTGTCACATATGCCTTGGTTGATTGCACAATCCTCGGTTACAAGGGTGCTCCTTTGGCTGTTTCTATTACTTTATGGATTTCAATGATAGCGTTGGCTCTGTATGTCCTGTTCTCAAAGAAGTTCAAGAAAACATGGACGGGCTTATCATCTCAGGCATTTAATTATCTTCTTACAGATTTGAAACTAGCTCTGCCTTCTGCAGCAATGATTTGCTTGGAGTATTGGGCTTTCGAACTTTTGGTCCTCTTGTCAGGTCTATTACCGAATTCGGAAGTAAACACTTCATTGATTGCATTAGGCGTAAACACTCAAGCCATTGCCTACATGATTATATATGGACTCAGCGCAGCTGCAAGCACAAGGGTGTCAAATGAATTGGGAGCAGGCAATCCTGACCGAGCTAAGAACGCCATGGTGGTTACTCTCAAGCTATCAGTCTTCCTTGCCATCGTTTTCGATTTGGCACTTTTGTTTGGCCAAAATCTTTGGATTAGTTTGTTTACTGATGACATTAGAGTTAAAGACGAGTATGCTTCACTGGTGCCCTTGATTGCGATTTCAGTATTACTTGATTCTTTCCAGGGAGTCTTGTCAGGGGTTGCCAGAGGATGTGGTTGGCAGAATACAGCTGCATACGTGAATCTAGCAGCCTTTTATTTGGTTGGTATGCCAGTGTCATGCCTCCTTGCATTCAAGACCTCACTACAAGCTAGGGGCTTATGGATTGGCTTGATTTGTGGGCTATGCTGCCAATCCGTGTCTCTCTACGTTCTCACAAGGCTTGCTAAATGGACTAGGCTAGATCTCTCCCGGGACAAAGTTGAAGCAAACTCCGCTGTGATTTA 1463 0.445 MASHGTVTPSTPLLEARGDGHGGQVTRGGGWWNKVLDMVEVKIQLHIAVPMVLTNLFYYLIPLVAVMFAGHLGEVQLAGSSLGNSWNVVTGQGIAVGLSGALETLCGQAFGSGDYRMLGVYMQSGCIISFLFCIVISVIWFFTEPILIFLHQSHSTAKATAVYMKYLIPGIFAYAFMQNLLRFLQTQSIVAPLIILSGLPLLIHIGVTYALVDCTILGYKGAPLAVSITLWISMIALALYVLFSKKFKKTWTGLSSQAFNYLLTDLKLALPSAAMICLEYWAFELLVLLSGLLPNSEVNTSLIALGVNTQAIAYMIIYGLSAAASTRVSNELGAGNPDRAKNAMVVTLKLSVFLAIVFDLALLFGQNLWISLFTDDIRVKDEYASLVPLIAISVLLDSFQGVLSGVARGCGWQNTAAYVNLAAFYLVGMPVSCLLAFKTSLQARGLWIGLICGLCCQSVSLYVLTRLAKWTRLDLSRDKVEANSAVI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00875 487 Pfam MatE 50 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva09g00875 487 Pfam MatE 271 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva09g00875 487 TIGRFAM matE: MATE efflux family protein 50 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva09g00875 487 MobiDBLite consensus disorder prediction 1 25 - -
Bva09g00875 487 PANTHER PROTEIN DETOXIFICATION 22 481 - -
Bva09g00875 487 CDD MATE_eukaryotic 40 472 IPR045069 GO:0042910|GO:1990961
Bva09g00875 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00875 Bva-Chr9 4508989 4511857 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00875 K03327 - gmx:100816310 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00875 09 4508989 4511857 Bva09g00875 09 4508989 4511857 ECH