Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00872 ATGGCAGCTTCGGCACCGGCGGTGGCTTTGAACGGAGTGAAGGTAGGGACGATATCGCAAGCATACTTGGAAAGCAGGGCAGTGAAGGAGACCAAAGCTTTGGTATCTGAACTCTGTCGCAAGTTTTACTCTCCTGGATGGGTCTCAGGGACCGGTGGCAGCATCACTATCAAGGTCCATGATGACTCCATTCCGAAATCACAGCAACTTATAATCATGTCCCCTTCAGGTGTTCAGAAGGAAAGAATGGAGCCAGAGGACATGTACATCATATCCCCAAATGGATCAACCTTGTTTGCTCCGTCTGCAAAACCTTATCCGCACAAACCTCCAAAGTGTTCTGATTGTGGTCCACTTTTTATGAAgGCATATGAGATGCGTGGTGCAGGGGCTGTTATCCACAGTCATGGGATGGAATCTTGCCTCGTAACAATGATCAATCCTTTATCAAAGGAATTTCGAATTGAAGCCTACCCTAAAACAACAGCGGTGTTGGTTCGCAACCATGGGATATATGTTTGGGGAGACTCAAGGATTAGTGCTAAAACACAGTCTGAGTGCTATCACTACCTATTTGATGCTGCTATCAAGCTTCACCAACTGGGGTTGGACTGGACTACTCCAGAACATGGTCCAATACGAAGtgttaaaaatgttataaggAGTGGTTTTAGATCAAATGTATCAGCTAAGGCACAAAAGACCGACCGTGATATTGAGCCATTTCCACGCTGTATTGTTCTTGACATTGAAGGGACTACTACTCCCATATCATTTGTTTCAGAGGTTCTCTTCCCTTATGCACGTGGTAATGTTGGGAGGCATCTATCTGCCACATATGATACTACAGACACTCAAGATGATATTAAGTTGCTTCGCTCACAAGTTCAAAGTGACCTTGAACAAGGCGTTGCGGGTGCAGTGCCCATCCCACCAGATGATGCTGGGAAAGAGGAAGTGATTGCTGCTTTGGTTGCTAATGTAGAAGCAATGATTAAAGCTGATAGAAAGATCACTGCCTTAAAGCAATTGCAAGGTCATATATGGAGAACTGGTTTTGAGAATAATGAATTAGAGGGGGCAGTTTTTGATGATGTGCCAGAAGCTTTGGAAAAGTGGAGTGCCTTGGGCATAAAGGTATATATCTATTCTAGTGGTAGCAGGTTGGCGCAAAGGCTAATATTTGGAAAGACAAATTATGGGGatctaagaaaatatttatcgGGTTTTTTCGACACCATAGTGGGgaacaaaaaagaaacacgCAGTTATGTTGAAATTTCAGAGTCACTTGGCGTGGACAAGCCAtcagatattttatttgtgacaGATGTTGTCCAAGAAGCTACAGCTGCAAAGGCAGCAGGTTTGGAGGTGTTAATTTCTATTCGGCCAGGAAATGGACCTCTTCCTGAAAACCACGGCTTCAAGACAATCAATTCCTTCGCAGAGATATG 1457 0.4255 MAASAPAVALNGVKVGTISQAYLESRAVKETKALVSELCRKFYSPGWVSGTGGSITIKVHDDSIPKSQQLIIMSPSGVQKERMEPEDMYIISPNGSTLFAPSAKPYPHKPPKCSDCGPLFMKAYEMRGAGAVIHSHGMESCLVTMINPLSKEFRIEAYPKTTAVLVRNHGIYVWGDSRISAKTQSECYHYLFDAAIKLHQLGLDWTTPEHGPIRSVKNVIRSGFRSNVSAKAQKTDRDIEPFPRCIVLDIEGTTTPISFVSEVLFPYARGNVGRHLSATYDTTDTQDDIKLLRSQVQSDLEQGVAGAVPIPPDDAGKEEVIAALVANVEAMIKADRKITALKQLQGHIWRTGFENNELEGAVFDDVPEALEKWSALGIKVYIYSSGSRLAQRLIFGKTNYGDLRKYLSGFFDTIVGNKKETRSYVEISESLGVDKPSDILFVTDVVQEATAAKAAGLEVLISIRPGNGPLPENHGFKTINSFAEI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00872 485 Gene3D - 257 353 - -
Bva09g00872 485 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 244 483 IPR023943 GO:0000287|GO:0019509|GO:0043874
Bva09g00872 485 Pfam Class II Aldolase and Adducin N-terminal domain 35 149 IPR001303 -
Bva09g00872 485 Pfam Class II Aldolase and Adducin N-terminal domain 160 195 IPR001303 -
Bva09g00872 485 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 155 485 IPR017714 GO:0005737|GO:0019509|GO:0046872
Bva09g00872 485 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 7 155 IPR017714 GO:0005737|GO:0019509|GO:0046872
Bva09g00872 485 SFLD enolase-phosphatase 244 484 IPR023943 GO:0000287|GO:0019509|GO:0043874
Bva09g00872 485 Pfam haloacid dehalogenase-like hydrolase 244 456 - -
Bva09g00872 485 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 244 484 - -
Bva09g00872 485 SUPERFAMILY AraD/HMP-PK domain-like 29 209 IPR036409 -
Bva09g00872 485 Gene3D - 354 485 IPR023214 -
Bva09g00872 485 SMART Aldolase_II_2 33 196 IPR001303 -
Bva09g00872 485 Gene3D - 28 212 IPR036409 -
Bva09g00872 485 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 328 456 IPR006439 -
Bva09g00872 485 CDD HAD_EP 245 466 IPR023943 GO:0000287|GO:0019509|GO:0043874
Bva09g00872 485 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 155 485 - -
Bva09g00872 485 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 7 155 - -
Bva09g00872 485 SUPERFAMILY HAD-like 244 485 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00872 Bva-Chr9 4491353 4496524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00872 K16054 - gmx:100796209 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00872 09 4491353 4496524 Bva09g00872 09 4491353 4496524 ECH