Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00870 ATGGCTACCGCCAATGATTTTCTTGCCACTCCCACCAAAACTCCTTCTGGAAAATCGGCTTCTGTGTCGAGGAGACATCCCAATCCCAGTTCGGGGGATTCTTCTGCATCTCGGGCTTCTGACAACTCCGATTTCAGGTCCCGATTCGCTGCCTACAATAGGCTTCAGGCGGCGGCAGTGGCCTTTGGAGAGAAGCTCCCAATCCCTGAGATCGTTGCTCTTGGTGGACAATCCGATGGCAAGAGTTCTCTCCTTGAAGCCCTCCTTGGCTTTCGCTTCAATGTGCGTGAGGTTGAGATGGGTACTCGTAGACCCCTCATTATCCAGATGGTTCACGATCCCACGGCTCTGGAACCTCGTTGCCGATTTCAGGAGGAAGATTCAGAAGAGTATGGAAGTCCTGTCGTTTTAGCATCTACTATTGCAGACATTATCAAGTCCAGAACAGATGCACTTTTGAAGAAAACTAAGACTGCAGTCTCTCCTAAGCCAATTGTAATGAGAGCTGAGTATGCGCATTGTCCTAACCTCACTATTATTGATACCCCTGGTTTTGTTCTTAAGGCAAAGAAGGGAGAACCAGACAACACACCTGAAGAAATTCTTTCAATGGTGAAATCATTGGCTAGTCCTCCCCATCGTATCCTCTTGTTTCTTCAGCAAAGTAGCGTCGAGTGGTGTTCATCATTGTGGTTGGACACCATTCGTGAAATCGATCCAACATTTAGGCGGACAGTAATTGTTGTCTCCAAATTTGATAATCGTCTCAAGGAATTTGGTGATCGGTGGGAAGTGGACCGCTATTTGAGTGCAAGTGGTTACCTTGGAGATAACACTCGTCCTTTCTTTGTAGCCTTACCAAAAGACAGAGGCAATGTTTCAAATGAGGAGTTTCGCCGGCAAATTTCTCAGGTAGACTCAGAGGTTCTGCGTCATCTCCGTGAGGGCGTCAAGGGAGGTTTTGacgaagaaaaatttaaaccgTTTGTTGGTTTTGGCTGTCTGAGGGATTACTTGGAGTCTGACCTTCAGAAGAAATACAAAGAAGCTGCACCAGCAACTCTAGCGTTGCTTGAGCAGCGTTGCAGTGAAGTCACTTCTGAACTAGCCAGAATGGACGCTAAAATACAGGCCACTTCAGATATTGCTCATCTTAGGAAATCTGCAATGCTGTATGCTGCTTCTGTCAGCACCCATGTGGGGGCACTGATTGATGGCGCAGCAGATCCGTCCCCTGAGCAATGGGGGAGAACAACGGCAGAAGAACAGTCAGAAAGTGGCATTGGAGTTTGGCCTGGTGTTATTGCAGATATAAGGCCTCCCAATGCTACTCTTCGGCTTTATGGAGGGGCTGCTTTTGAGAGGGTGATGCATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCCCGGTGTCAAGGGAGAAGGTTGCAAATATATTGCTTGCCCatgctggccgtggagggggaAGAGGAGTAGCAGAAGCAGCAGCAGAAATTGCACGTGCTGCTGCTAGATCATGGCTTGCTCCTCTTCTAGACACTGCTTGTGACCggcttgcttttgttttgggaAATCTCTTTGATCTGGCTCTCGAAAGAAATCGCAGTAATGACTCAGAATATGGGAAGAAAACGGGAAATATGGATGGCTATATTGGTTTTCATGCTGCTTTAAGACGTGCTTACAATCGATTCGTTAGGGATCTTACTAAGCAGTGCAAGCAGCTAGTCAGACACCACCTGGATTCAGTAACGAGTCCATACTCACAGGTCTGCTATGGTAATGACTTTCAAGTATGTTATAGCCTTAATGCTACCAAGTTCAACCAAGCTTCTGCCAGTTCATTTTGTCTGGAACTGAGTGATACGAAGTTGGCTTCGCATAACGAAATGAAGGAACAGGAAAATATACCTCCAGGAAAGAATGCTCAGGAAATTACACCGGGTAAATCtgcagaagaaagagaagcttTACGAGAAAGCCAGATGACAATCCCAGAGACCCCATCTCCAGATCTGCAAGGTGAGCCAGTATATGCTGGGGCCAGAAAGGAGTTCGGAAATTGTAATGATAatggaccaagaaagagagcgTCAAGAATGACAGGAAACGGCCAAAACCCTGATCTTATCACAGTGCAGAATGGTGGTCTGCTATTTGGAAATGGGGATAGATCAGGATCCGCCTACTCAGAAATCTGTTTATCAGCTGCTCAACATTTTGCGCGAATACGTGAAGTCCTTGTGGAAAGAGGCGTGGCATCAACATTAAATTCTGGATTCCTGACACCCTGCCGGGACCGGCTAGTGGTGGCTCTTGGGTTAGATTTGTTTGCTGTGAGTGATGAAAAATTCATGGACATGTTTGTTGCCCCGGGTGCCATAGATTTACTACAGAATGAACGAGAGTCCATTCGAAAACGCCAGAAGATACTTCAGTCTTGCTTGAACGACTTCAAGAACGTTGCTCGAGCACTTTG 2483 0.4491 MATANDFLATPTKTPSGKSASVSRRHPNPSSGDSSASRASDNSDFRSRFAAYNRLQAAAVAFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLIIQMVHDPTALEPRCRFQEEDSEEYGSPVVLASTIADIIKSRTDALLKKTKTAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPDNTPEEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDTIREIDPTFRRTVIVVSKFDNRLKEFGDRWEVDRYLSASGYLGDNTRPFFVALPKDRGNVSNEEFRRQISQVDSEVLRHLREGVKGGFDEEKFKPFVGFGCLRDYLESDLQKKYKEAAPATLALLEQRCSEVTSELARMDAKIQATSDIAHLRKSAMLYAASVSTHVGALIDGAADPSPEQWGRTTAEEQSESGIGVWPGVIADIRPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVAEAAAEIARAAARSWLAPLLDTACDRLAFVLGNLFDLALERNRSNDSEYGKKTGNMDGYIGFHAALRRAYNRFVRDLTKQCKQLVRHHLDSVTSPYSQVCYGNDFQVCYSLNATKFNQASASSFCLELSDTKLASHNEMKEQENIPPGKNAQEITPGKSAEEREALRESQMTIPETPSPDLQGEPVYAGARKEFGNCNDNGPRKRASRMTGNGQNPDLITVQNGGLLFGNGDRSGSAYSEICLSAAQHFARIREVLVERGVASTLNSGFLTPCRDRLVVALGLDLFAVSDEKFMDMFVAPGAIDLLQNERESIRKRQKILQSCLNDFKNVARAL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00870 827 Coils Coil 355 375 - -
Bva09g00870 827 MobiDBLite consensus disorder prediction 686 709 - -
Bva09g00870 827 MobiDBLite consensus disorder prediction 631 654 - -
Bva09g00870 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 360 IPR027417 -
Bva09g00870 827 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 65 352 IPR030381 GO:0005525
Bva09g00870 827 PRINTS Dynamin signature 171 188 IPR022812 -
Bva09g00870 827 PRINTS Dynamin signature 240 256 IPR022812 -
Bva09g00870 827 PRINTS Dynamin signature 93 110 IPR022812 -
Bva09g00870 827 PRINTS Dynamin signature 68 86 IPR022812 -
Bva09g00870 827 Pfam Dynamin family 71 251 IPR045063 -
Bva09g00870 827 MobiDBLite consensus disorder prediction 1 41 - -
Bva09g00870 827 SMART dynamin_3 45 288 IPR001401 GO:0003924|GO:0005525
Bva09g00870 827 CDD DLP_1 66 352 IPR001401 GO:0003924|GO:0005525
Bva09g00870 827 Gene3D - 37 400 IPR027417 -
Bva09g00870 827 PANTHER DYNAMIN 45 826 IPR022812 -
Bva09g00870 827 PANTHER DYNAMIN-LIKE PROTEIN C 45 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00870 Bva-Chr9 4476029 4481017 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00870 - - cit:102630272 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00870 09 4476029 4481017 Bva09g00870 09 4476029 4481017 ECH