Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00867 ATGGCTGCCACTAGCTTGGGAACTCCATGGGGTCTTAGAAGAGCAGCTCAAGCTTTTGCGCGCTCTCATTTTCTCCGAAGCAATGCTAAACTCTCTTTCCGAAGAATCCTCTGCTCTTTTCCTGTCGCCGTTACTGGTTCTTCAGCTTCAGGAGTAAGCCAGACTGTACAAGCTTTAAAGGGAGATGTTGATGTTTTACTAAACGGAGTAGGAGAAAAAAGTACTATAAAAGAAGTGAAGAATATTCTTGAGATGGCCCGGCGGGCATCATTGAGACGAGAGGTTCTCCACACGAATTTTCTTACCCCTCCAGTGGTGAAGGAATCTATGCAGGTGTTGGAAAAATTAGCAGACGTGAAAGCAATTGCTCAAGGAGGTTACCCACAGGCTGAACGTTGCCGGATTTCTGTTGGACATCCAGAAGAACTGACGAGTGATCCTGATATAATTGCAGCATTGAGTGTCACAGGAAATTTTCAGTTTGAACCTTGTTCTCATGGTGACTTCCTTGGCGCAATTCTTGGCACAGGAATTTCTAGGGAGAAGCTTGGAGATATTATCTTGCAgGGAGAACAGGGTGCTCAGGTACTTGTTGTTCCAGAGCTTGTTGATTTTCTCATGTCATCACTAGGTAAGGTTGGCAATGTTTCAGTATCTTGCAGCAAGATACCGTTAATTTCTCTTGATTATGAACCACCAAGAACCAAATCATTTAAAACTGTAGAAGCATCATTAAGAGTTGATGCTCTTGCTAGTGCTGGGTTTAAGATTTCACGATCAAAGCTAGTTGACTTAATCAGCAATGGCAATGTGCGTGTCAACTGGACCCCTGTTAAAACCAAGGGAACCACACTCAAGACTGGAGATATTGTATCCATTAGTGGAATGGGAAGATTAAAGATTGGAGAAATAAACACAACAAGGAAGGGGAAGTCCGCCGTTGAACTCATTCGATACTTGTA 962 0.4324 MAATSLGTPWGLRRAAQAFARSHFLRSNAKLSFRRILCSFPVAVTGSSASGVSQTVQALKGDVDVLLNGVGEKSTIKEVKNILEMARRASLRREVLHTNFLTPPVVKESMQVLEKLADVKAIAQGGYPQAERCRISVGHPEELTSDPDIIAALSVTGNFQFEPCSHGDFLGAILGTGISREKLGDIILQGEQGAQVLVVPELVDFLMSSLGKVGNVSVSCSKIPLISLDYEPPRTKSFKTVEASLRVDALASAGFKISRSKLVDLISNGNVRVNWTPVKTKGTTLKTGDIVSISGMGRLKIGEINTTRKGKSAVELIRYL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00867 320 ProSiteProfiles S4 RNA-binding domain profile. 245 305 - -
Bva09g00867 320 SMART s4_6 245 307 IPR002942 GO:0003723
Bva09g00867 320 TIGRFAM PS_II_S4: photosystem II S4 domain protein 76 318 IPR017506 -
Bva09g00867 320 Pfam Putative RNA-binding domain in YlmH 152 225 IPR040591 -
Bva09g00867 320 Gene3D - 146 228 IPR012677 -
Bva09g00867 320 Pfam S4 domain 249 291 IPR002942 GO:0003723
Bva09g00867 320 CDD S4 246 295 - -
Bva09g00867 320 Gene3D - 239 295 IPR036986 GO:0003723
Bva09g00867 320 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 52 320 - -
Bva09g00867 320 SUPERFAMILY Alpha-L RNA-binding motif 104 304 - -
Bva09g00867 320 Gene3D - 72 138 - -
Bva09g00867 320 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 52 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00867 - - gmx:100793767 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00867 09 4468179 4471770 Bva09g00867 09 4468179 4471770 ECH