Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00861 ATGGAGAACTCGCAACTGCAGAATGGTTCCCCTTCATTGGCTTTACTTGGGTCACAGCAAAGCCAAGGCTCAGATGCTGTGGCTGTTGGAACGGAGTCAaagccaaagaagaaaatctgCTGTGCTTGCCCTGACACCAAAAGGCTGCGAGATGAATGCATAGTAGAGCATGGTGAAGCAGCTTGTGCCAAATGGATTGAGGCTCATCGTCTGTGCCTCCGTGCTGAGGGATTCAATGTTTG 242 0.4711 MENSQLQNGSPSLALLGSQQSQGSDAVAVGTESKPKKKICCACPDTKRLRDECIVEHGEAACAKWIEAHRLCLRAEGFNV 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00861 80 Pfam Cytochrome C oxidase copper chaperone (COX17) 36 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
Bva09g00861 80 MobiDBLite consensus disorder prediction 1 35 - -
Bva09g00861 80 SUPERFAMILY Cysteine alpha-hairpin motif 31 80 IPR009069 -
Bva09g00861 80 Gene3D CytochromE C oxidase copper chaperone 16 80 - -
Bva09g00861 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
Bva09g00861 80 MobiDBLite consensus disorder prediction 1 28 - -
Bva09g00861 80 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 40 80 - -
Bva09g00861 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00861 Bva-Chr9 4433450 4433692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00861 K02260 - gmx:100779570 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00861 09 4433450 4433692 Bva09g00861 09 4433450 4433692 ECH