Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00859 ATGGACCCCGATGTTATGGAAATTCCACCTCCAATTCATCATCCTCGGACATTGATTAAGCAGAAGAAAGAGGTTATCTTGCATGATGTGATTGACATTGACAATGATGAAGATTCTGCCGATATAGTGTTAATTGGGGAGAAAGTTGGTAGAAGTAACAAAGGAAAGGCTGTTGAAACCAATTATGATGGTTATGGTGATCTTCGATCAATGGAAGTGGCTGATTATGTTCTTGGTCCGCCTGATGTGGAAAAATTTGGACCAACTGGTGGGATTCAGTCCTCTAATAGTTTTGCCTCAGTTTCACATAATTCAACCAATGTTGATAGTCATAGCTCTGATCTATCCTATGAAGAAGATGACTGCATCGATCTTTTTTCAGATGACTACATGGATATAGATCAGTATGCCATATTGCAGGCACACTTTGATAACATGGATATACCTCCTGGAGTCGAGGCACCTATTCCTTGGATGCCAGATTTTGATCTAAGCTCAAAGAAGACTGGAAGAAGTTCATTGTTGCCTTGGTGTCATACACAACCAGATGGGGTTAATTCTAGTTTGCAAACTGATAAGGTTGCTATTGGTCACCCTTCTGGATTAGATTTGTCTCATTCTCAGTTTTTTTCTGAAGTTTCCCCTGGTGAAAATAAATCAGCTGCTGTGCAACATGGAGCGACTGTGTCAAATATGTCACTTGGGGTAGAGACATCTAAACCGCAGTGGTTTTTAGGACCATTCCAAAGTAAAAAGAAGcatccttttgtttttgattcaACTAACAATGGCTCTGTAGATAATTCAGAGGTCACATATCTGGCTCCTGCAAGTGATCCACCACATTGGCCCCAGTTTAAAAGTGGAAAAAAGTTAGCTACCAAAACTGGTTTTCAcccttcaaatttctttaagcCTGTAGTTGGGTCAGACCATCCTCTTGGAATAGAATCAGCAAACCAATGGTGGAACGAGTCTCATAATTATAAGGCATCCTTTCTGAATAATACTGCTTattccaatttcttttatccatTTGATCCTGTCCATAGTCATCAGCTTAATTGGGCTGATCCTTGGGGTCAGAATCCTTGGTTTCACAATTCTGCCAGAGAAGGAAATAATGGAACCACATCCAATAGCCCTGTTGTAACAATCTCTGACGAAGATAGAGATgaaattatgagaaatttccaacaatttaaacaatttgacACTGTTGAAGATGTTTCAGATCATTATTATGTTGGCAGCAATTCTTCTATGAAGCAGAATTCAAAGAATTGGGCAAAAAGAATCCAGGAAGAGTGGAAGATTCTGGAGAAGGATTTGCCAGATACAATATTTGTCAGAGTTTACGAATCAAGGATGGATCTGTTGAGGGCTGTAATTATTGGAGCGGAGGGAACTCCTTATCACGATGGtctcttcttttttgatattttctttcccaGCGGCTATCCCAATGTTCCACCGCAAGTCCACTACCACTCTGGTGGTCTTCGGCTCAACCCAAATTTGTATGGTTGCGGCAAAGTATGCCTTAGTCTGCTAAACACCTGGTCTGGAAATAGGAATGAGAAGTGGATCCCTGGTGTTTCAACAATTTTGCAGGTTCTAGTCTCTATACAAGGTCTGATCTTAAATACAAAACCTTACTTTAACGAACCTGGATATGCACATATGAGTGGTTCAGCACCTGGTGAAATGAAGTCCTTGCAGTATAATGAGGACACATTCATCCTATCGTTGAGGACTATGATGTATATGATAAGAAGGTCCCCAAAGCATTTCCGGGACTTTGTGCTGGGGCATTTCTGCAGCCGAGCTCATGATATTCTGGTGGCTTGCAAAGCATACATGGATGGAGCTCAAGTTGGATGTCTGGTCAAAGGTGGTGTCCAGGATGTTGATGAGGGCGATAGGAGCTGCTCGATGCAGTTTAAGCACTCTCTAGGTGGGTACGTGGATCAGCTTGTTAGAGAGTTTTCACAGATTGGAGTTAAGGACTGTGAGAAATTCATTTCAGCAACTCCGACAACGGAAGTGAACCAGCCGGTGGCAGTGACTGGTATGCCTGAAGTTGCTACTTG 2093 0.3985 MDPDVMEIPPPIHHPRTLIKQKKEVILHDVIDIDNDEDSADIVLIGEKVGRSNKGKAVETNYDGYGDLRSMEVADYVLGPPDVEKFGPTGGIQSSNSFASVSHNSTNVDSHSSDLSYEEDDCIDLFSDDYMDIDQYAILQAHFDNMDIPPGVEAPIPWMPDFDLSSKKTGRSSLLPWCHTQPDGVNSSLQTDKVAIGHPSGLDLSHSQFFSEVSPGENKSAAVQHGATVSNMSLGVETSKPQWFLGPFQSKKKHPFVFDSTNNGSVDNSEVTYLAPASDPPHWPQFKSGKKLATKTGFHPSNFFKPVVGSDHPLGIESANQWWNESHNYKASFLNNTAYSNFFYPFDPVHSHQLNWADPWGQNPWFHNSAREGNNGTTSNSPVVTISDEDRDEIMRNFQQFKQFDTVEDVSDHYYVGSNSSMKQNSKNWAKRIQEEWKILEKDLPDTIFVRVYESRMDLLRAVIIGAEGTPYHDGLFFFDIFFPSGYPNVPPQVHYHSGGLRLNPNLYGCGKVCLSLLNTWSGNRNEKWIPGVSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSAPGEMKSLQYNEDTFILSLRTMMYMIRRSPKHFRDFVLGHFCSRAHDILVACKAYMDGAQVGCLVKGGVQDVDEGDRSCSMQFKHSLGGYVDQLVREFSQIGVKDCEKFISATPTTEVNQPVAVTGMPEVAT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00859 697 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 428 588 IPR000608 -
Bva09g00859 697 SMART ubc_7 431 588 - -
Bva09g00859 697 Pfam Ubiquitin-conjugating enzyme 432 553 IPR000608 -
Bva09g00859 697 Gene3D Ubiquitin Conjugating Enzyme 387 670 IPR016135 -
Bva09g00859 697 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 19 677 - -
Bva09g00859 697 SUPERFAMILY UBC-like 418 596 IPR016135 -
Bva09g00859 697 CDD UBCc 431 557 IPR000608 -
Bva09g00859 697 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 19 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00859 Bva-Chr9 4424358 4429349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00859 396 675 Miscellaneous Gene Families AT2G33770 52.128 1.43e-87 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00859 K10581 - gmx:100809853 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00859 09 4424358 4429349 Bva09g00859 09 4424358 4429349 ECH