Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00852 ATGGAGGAGGAGAGGAAGGAGTTGCAGATTCCGAAAACCGTTGTCTACGACACTCTGAGTCCTCTTTGTCTTACTCCTTCCAACCAGTCTCCGGCTTTCGATGACCTCGAACCCTATTCAGTATTCCGGAATGAAATTTCTCTATCCACTCCCCAATGTGCTTCGCCCGACACTGCTGCTCCGGATTTCTTCTCTCTCGATGTTGGCACCGAAGATATTGACAGAGATTCCCTCCCCGCGACATTGTCTACGCCTGCTGCAGAGGATGAGCCCGCGACCTCGGCCCTTGTATCTGAAGCAAAGCTTGAGAGCGGTTGGTTTCGTGGAAATTGTAAATTTAGGAGTCCTATGCTTCAGCTGCATAAAGAGATACTGGATTTCTGTGAATTTTTGTCCCCTACTCCAGAAGAACAAGCTGCACGTGACAAGGCAATAGAAACTGTCTCTAAagtaataaaacatatatggCCTCACTGCGAGGTAAAAGTCTTTGGGTCTTTCAGAACAGGACTGTATCTTCCAACTAGTGATATTGATGCGGTGATATTGGGGTCTGGCTTGCCAAATCCTCAGCTTGGCTTGAGTGCACTTTCTATGGCATTGTCACAAAGGGGTATAGCAAAAAAGATACAGGTCATTAGAAAGGCTCGAGTgccaattattaaatttgttgaaaagaGGAGTGGTGTTGCATTTGATATAAGTTTTGATGTGGAAAATGGACCCAAAGCTGTTGATTATATTCAGGAAGCAGTGACTAGGTGGCCACCACTACGGCAattgtgtttgattttgaaagtATTTTTGCAACAGAGAGAACTAAATGAGGTTTATTCTGGAGGTATTGGCTCTTATGCACTCCTTGCGATGCTGATTGCAATGTTGCGGAATCTCCGTGAGAGTCAAGCTTCTATGGAACACAACCTGGGAGTACTTTTGGTACGTTTTTTTGATTTCTATGGACGCAAACTAAACACCTCAGATGTTGGTGTCTCTTGCAATGGAGCAGGAACATTCTTCTTGAAAAGTAGTAAAGGGTTTACCAACAAAACACGGCCATTTCTTATTTCCATAGAGGATCCACAGGCACCAGAGAACGATATTGGAAAGAACTCCTTTAATTATTTCCAGATGAGGTCAGCTTTTGCAATGGCTTTCACTACATTGACAAATCCGAAGACCATCTTGGATTTGGGCCCTAATCGGAGCATTCTTGGCACTATAATTAGACCAGACCCAGTCTTGCTGGAACGTAAAGGGGGTTTGAATGGGGAGGTAATTTTCAACAGCTTGCTTCCCGGAGCTGGTGAGCCATTACAACAAAAGTATAGGGACCAGGATATGTTATGTAATTGGCAGTTAGATTATGAAGAAGAACCACTGCCACGGAGAACCCAAGGTAGTAAAGATGCTAGCACACATTCTtcaggaaagaaaaggaaagctgCGGCCTCAGTGAATTCCAGCAAGAAACTAAAAGATAATAGGGACCTTGGGACCAGGAGTGgtacaaaaaagaaacacaagagAAAACAGTTTAGACTGTA 1547 0.4176 MEEERKELQIPKTVVYDTLSPLCLTPSNQSPAFDDLEPYSVFRNEISLSTPQCASPDTAAPDFFSLDVGTEDIDRDSLPATLSTPAAEDEPATSALVSEAKLESGWFRGNCKFRSPMLQLHKEILDFCEFLSPTPEEQAARDKAIETVSKVIKHIWPHCEVKVFGSFRTGLYLPTSDIDAVILGSGLPNPQLGLSALSMALSQRGIAKKIQVIRKARVPIIKFVEKRSGVAFDISFDVENGPKAVDYIQEAVTRWPPLRQLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRNLRESQASMEHNLGVLLVRFFDFYGRKLNTSDVGVSCNGAGTFFLKSSKGFTNKTRPFLISIEDPQAPENDIGKNSFNYFQMRSAFAMAFTTLTNPKTILDLGPNRSILGTIIRPDPVLLERKGGLNGEVIFNSLLPGAGEPLQQKYRDQDMLCNWQLDYEEEPLPRRTQGSKDASTHSSGKKRKAAASVNSSKKLKDNRDLGTRSGTKKKHKRKQFRL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00852 515 Gene3D Beta Polymerase, domain 2 133 241 IPR043519 -
Bva09g00852 515 CDD NT_PAP_TUTase 140 250 - -
Bva09g00852 515 Gene3D - 117 391 - -
Bva09g00852 515 SUPERFAMILY PAP/OAS1 substrate-binding domain 256 395 - -
Bva09g00852 515 PANTHER POLY(A) RNA POLYMERASE 101 507 IPR045862 GO:0004652|GO:0031499|GO:0043631
Bva09g00852 515 MobiDBLite consensus disorder prediction 460 515 - -
Bva09g00852 515 Pfam Cid1 family poly A polymerase 308 366 IPR002058 -
Bva09g00852 515 MobiDBLite consensus disorder prediction 466 483 - -
Bva09g00852 515 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 101 507 - -
Bva09g00852 515 Pfam Nucleotidyltransferase domain 146 246 IPR002934 GO:0016779
Bva09g00852 515 SUPERFAMILY Nucleotidyltransferase 115 268 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00852 Bva-Chr9 4400923 4406405 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00852 K03514 - gmx:100811320 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00852 09 4400923 4406405 Bva09g00852 09 4400923 4406405 ECH