Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00851 ATGCCAATTTGTTCgtcaacttcttcttcttctttttcatcatcGTCTTCTTCATTTGGATCTTCGAGCAACACCAACATATGGATCGTGCATGGCATTGTGGCCGGAGCTGCCATTGCAGCAGTCATCGGTGCTCACGTTTATCTGGATCGATTCAGGAAATTCCGGAGTAGGGTCGTCGGAATCATACCCGCCAGGTTTGCTTCTTCACGGTTTGAGGGCAAGCCTCTCGTTCAAATCCTTGGGAAGCCTATGATCCAGAGGACATGGGAAAGGGCGAAAATGGCAACTACATTGGATCATATTGTCGTGGCCACTGATGATGAAAAGATTGCTGACTGCTGTCGCCAATTTGGAGCAGATGTTGTAATGACATCAGAATCTTGCAGAAATGGTACTGAGCGCTGCGATGAAGCCCTTCAAAAGCTTGGAAAAAAGTATGATATAGTTGTCAACATTCAAGGGGATGAGCCTCTTATTGAACCTGAGATAATAGATGGTGTTGTTAAAGCCTTGCAGGCTGCTCCAGATGCAGTGTTTAGTACTGCAGTCACATCCTTAAAACCTGAAGACGCAGATGATCCGAATAGAGTGAAATGTGTGGTGGATAACAATGGCTACGCCATCTATTTTTCACGAGGACTGATTCCATTCAACAAGTCCGGGAAGGTCAATCCACAGTTCCCTTATCTCCTTCACCTTGGAATTCAGAGCTATGATACAAAGTTTCTGAAGATATATCCAGATCTTCAGCCTACTCCGTTGCAACTTGAGGAGGATCTGGAGCAGCTCAAGGTTCTTGAGAATGGCTATAAGATGAAGGTAATTAAAGTTGACCATGAGGCCCATGGCGTTGACACTCCTGAAGATGTTGAAAAGATAGAATCTCTTATGCTCGAGAGGAACTTGTCTTG 914 0.4365 MPICSSTSSSSFSSSSSSFGSSSNTNIWIVHGIVAGAAIAAVIGAHVYLDRFRKFRSRVVGIIPARFASSRFEGKPLVQILGKPMIQRTWERAKMATTLDHIVVATDDEKIADCCRQFGADVVMTSESCRNGTERCDEALQKLGKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDADDPNRVKCVVDNNGYAIYFSRGLIPFNKSGKVNPQFPYLLHLGIQSYDTKFLKIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVEKIESLMLERNLS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00851 304 SUPERFAMILY Nucleotide-diphospho-sugar transferases 59 301 IPR029044 -
Bva09g00851 304 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 57 299 IPR004528 GO:0008690
Bva09g00851 304 MobiDBLite consensus disorder prediction 1 21 - -
Bva09g00851 304 CDD CMP-KDO-Synthetase 58 297 IPR004528 GO:0008690
Bva09g00851 304 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, MITOCHONDRIAL-LIKE 12 304 - -
Bva09g00851 304 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 12 304 - -
Bva09g00851 304 Pfam Cytidylyltransferase 61 271 IPR003329 -
Bva09g00851 304 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 50 299 IPR029044 -
Bva09g00851 304 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 61 292 IPR004528 GO:0008690
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00851 Bva-Chr9 4397337 4400128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00851 K00979 - gmx:100818593 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00851 09 4397337 4400128 Bva09g00851 09 4397337 4400128 ECH