Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00850 ATGGCTACCGTGCTTGAATCGCTTAGCGTTTGTCGCTCTTCTTCTCTTCCGCCGGCCATTACTACCTCATCGATTTCTTCATTCTCGTCCCTTAGGAACTCTTCTAAGTTGCCCCACTACAGAGGCCTTAAGCTCAGGCAGATTGCAGCAAATCAATCCTCAGGATTTGTGAATTCCAGCTCGGGAATCGCTCGTCGTGGTGGACGCGTCGTGTGCGAGGCTCAAAATACCGCTGTTGAAGTCGGTTCCGTTACCGAGGCAAACTGGCAGTCACTTGTCATTGAATCTGAATCTCCTGTTTTGGTCGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGTATGATCCACCCTATAGTGGATCAACTGGCAAAGGAATACACTGGCAAGCTTAAATGTTACAAAGTTAATACTGATGAGAGCCCTGAAACTGCTACTCGGTATGGAATTCGAAGCATACCAACCGTCATGATCTTCAAGAACGGTGAGAAGAAAGATACAATCATTGGGGCTGTGCCCAAGTCGACATTGACCACGAGCATAGAAAAACTCTTGTG 554 0.4819 MATVLESLSVCRSSSLPPAITTSSISSFSSLRNSSKLPHYRGLKLRQIAANQSSGFVNSSSGIARRGGRVVCEAQNTAVEVGSVTEANWQSLVIESESPVLVEFWAPWCGPCRMIHPIVDQLAKEYTGKLKCYKVNTDESPETATRYGIRSIPTVMIFKNGEKKDTIIGAVPKSTLTTSIEKLL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00850 184 CDD TRX_family 87 181 - -
Bva09g00850 184 TIGRFAM thioredoxin: thioredoxin 85 182 IPR005746 GO:0015035
Bva09g00850 184 Pfam Thioredoxin 81 181 IPR013766 -
Bva09g00850 184 ProSitePatterns Thioredoxin family active site. 101 119 IPR017937 -
Bva09g00850 184 PANTHER THIOREDOXIN M-TYPE PROTEIN 2 184 - -
Bva09g00850 184 SUPERFAMILY Thioredoxin-like 76 184 IPR036249 -
Bva09g00850 184 PANTHER GEO12009P1 2 184 - -
Bva09g00850 184 ProSiteProfiles Thioredoxin domain profile. 65 184 IPR013766 -
Bva09g00850 184 Gene3D Glutaredoxin 81 184 - -
Bva09g00850 184 PRINTS Thioredoxin family signature 148 159 - -
Bva09g00850 184 PRINTS Thioredoxin family signature 108 117 - -
Bva09g00850 184 PRINTS Thioredoxin family signature 100 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00850 Bva-Chr9 4394205 4394552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00850 K03671 - gmx:100811845 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00850 09 4394205 4394552 Bva09g00850 09 4394205 4394552 ECH