Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00846 ATGAGGGGACCTTTGGGCGCTGTGGTAGGAAGGTACCCATCAAGTGATGGAAGTACCCAACTGGGTGGAATCATAAGGCACAACAGGAAATGCAGAGACATCGCTGTTTTGGTGATTTTCATAGCTTTCTGGATAGCAATGATTGTCAACTCCAGCTTTGCTTTCAACAAGGGAAACCCACTAAGGCTTACTTATGGGCTGGACTACAAAGGGAATGTCTGTGGGGATAGGCATGCACACCCTGGTCTTCGAGAATTGGAAGTCAGATATTGGTTAAATCCTAATCAGGTTTATCAGAGTGGCTTGAAGGATAGTCAATTCAAGCTGGCCGATGCCCGCAGTATATGCTTGTTGGATTGCCCTATGCCTTCTGAAGATTCACTTAACTGGGTGTGCGACTATCCTGAGGGAGATATCCGTATGTCAGCCAAAGATTGGACTGATAGGAATTATGATTATTTCGAGTTCCTTACTCCAGAAATGAGAAACTCCTCTCTTCAACTCCAGGGCCCTTGTTACCCTGTCCTATTTCCAAGTGTAAATGTTTATTGGAGCTGCCAATTTATAGCTCGAGTGTCGAATGTGTCTTTAAAGCACTGGCAGCAGATGGGTGGAGTTAACATCAATGAAGACATGGTCATAGATGAATCCATTCACAAATCTATCAATTCTCGGTCAGCTGTTTTAAAGAGATACATGGCTGATATTGCAAAGTCATGGCCAGTATTGATCGTTTGTGGAGGAATTTTACCTCTGTTTTTGTCTGTAATTTGGCTTTTGATGATACGCCATTTTGTTGCTGCAATGCCTTGGATAACAGTGGTGCTCTTTAATGTTCTCATAGTGTCAGTCACCATGTTCTACTACCTAAAAGctGGATGGATTGGAAACGATGCTATCTCTCCTATCATCGGGGAGCCTGACCCATATATTCATGTGTATGGGAGGGAACTAACTCATCTACGTGGTGTTGCTGTACTCATGACCTTTATAATGGCTGTTGCCATTCTCACATCTATTGCTATCATTCGACGGATTCTTATGGCAACATCTGTTCTTAAGGTTGCTGCGAAAGTGATAGGAGAAGTTCAAGCACTGATAATTTTTCCACTCATACCATATGGTATCCTTGCAGTATTTTACATGTTGTGGATCTCAGCTGCTCTCCACTTATTCAGCTCTGGCGAGGTTGTTCGGAATAACTGCAATTCTAATTGCTGCACATATGATCTCATAGCCAAACGGGTGAACTGTGATAGTTGCTGTGGATATAGCATTAAATACACACCCCATATAGGAGTTGCTATCCTTTTTCACCTATTTGGCATTTATTGGGCTACACAATTTTTCATAGCATGCTCTTCAACAGTGGTTGCTGGATCTGTTGCCTCTTACTACTGGGCTCGCGGTGAAGTATCTGTTGAAATTCCTTTTCTTACTGTATTTTCCTCCATGAAGAGGCTTACGCTTTACAACCTTGGTTCTGTTGCTCTTGGCTCTCTAATAGTATCATTTGTAGAATCAATCCGATTTCTGCTTGAATCTATTCGTCGAAAACTGAAGCTCTCAAGTCACACACCTGAAGGCTGGATAGGCAAGACTGCACAATGCTTTCTCAGGTGCATTGAATGGACCATCAAATCAGTGAACCGAAATGCTTACATCATGGTTGCTATAACGGGTAAAGGCTTCTTTAAAGCTTCTGCTATTGCCACAGTGTTGATCATGAACAACATCCTACGGATAGGACGTGTCAATGTGATTGGAGATGTTATTTTGTTCCTCGGAAAACTATGTGTGAGCCTCTCAAGTGCTGTGTTTGCTTTCCTCATGTTGGACACACACAAGTACAGTTCTGCTCATAACAAGATCTCATCTCCGCTCCTGCCTGTTGTGGTCTGCTGGGCTCTTGGATATATCGTTGCGACTCTTTTCTTTGCAGTGGTGGAGATGTCAATCGATACCATCATTCTCTCATTTTGCCAAGATTCTGAGGAGCATCAAGGAACAGCCCAGTTTGCTCCACCCCTTCTTATTGAAACTCTAAACGACCAAAATGAGATGCAACGACTTACGCAAGGACCCCAATG 2090 0.4301 MRGPLGAVVGRYPSSDGSTQLGGIIRHNRKCRDIAVLVIFIAFWIAMIVNSSFAFNKGNPLRLTYGLDYKGNVCGDRHAHPGLRELEVRYWLNPNQVYQSGLKDSQFKLADARSICLLDCPMPSEDSLNWVCDYPEGDIRMSAKDWTDRNYDYFEFLTPEMRNSSLQLQGPCYPVLFPSVNVYWSCQFIARVSNVSLKHWQQMGGVNINEDMVIDESIHKSINSRSAVLKRYMADIAKSWPVLIVCGGILPLFLSVIWLLMIRHFVAAMPWITVVLFNVLIVSVTMFYYLKAGWIGNDAISPIIGEPDPYIHVYGRELTHLRGVAVLMTFIMAVAILTSIAIIRRILMATSVLKVAAKVIGEVQALIIFPLIPYGILAVFYMLWISAALHLFSSGEVVRNNCNSNCCTYDLIAKRVNCDSCCGYSIKYTPHIGVAILFHLFGIYWATQFFIACSSTVVAGSVASYYWARGEVSVEIPFLTVFSSMKRLTLYNLGSVALGSLIVSFVESIRFLLESIRRKLKLSSHTPEGWIGKTAQCFLRCIEWTIKSVNRNAYIMVAITGKGFFKASAIATVLIMNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYSSAHNKISSPLLPVVVCWALGYIVATLFFAVVEMSIDTIILSFCQDSEEHQGTAQFAPPLLIETLNDQNEMQRLTQGPQ 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00846 696 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 693 - -
Bva09g00846 696 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 693 IPR007603 GO:0022857|GO:0055085
Bva09g00846 696 Pfam Plasma-membrane choline transporter 327 665 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00846 Bva-Chr9 4376268 4380655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00846 K15377 - gmx:100815939 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00846 09 4376268 4380655 Bva09g00846 09 4376268 4380655 ECH