Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00843 ATgacgaagaagaaggagaagaaagtaAATGTGTCAGGAAAACCAAAGCATTCACTTGATGTGAACAGGAGCAATGACAGCAACAAGGGCTCGCGTAGTGCCGCTACTGTTCGGCGCCTTAAGATGTACGATACGAAACCCTCGAGAGATCGTAAAGGAAAGATTTTGAAGAATGAGTTTCAATCCAAGGAGTTGCCGAATACCCGCATCCAACCCGATCGTAGATGGTTCGGAAATACTCGTGTTGTAAATCAAAAACAGCTTGAATTTTTCCGGGAAGAGCTGCAAAACCGCATGTCAAACAGTAACGTTGTCATTTTGAACGAGAGGAAACTGCCTTTATCCCTCTTAAACGATCACCAGAAGCAAGCAAGAGTTCATCTTCTTGATAGAGAGCCTTTTGGGGATGCATTTGGACCTAAGACAAAAAGGAAACGCCCTAACCTCTTGGCAGCAGATTATGAGTCCTTAGTCAAGAAAGCTGACAATTCTCAGGAGGCTTTCCAGCAGAAGTATGATGCTAGCGGATCTGTAGAAggtaaagaagaagatggTTTTAGAGATTTAGTTCGCCATACAATGTTTGAAAAAGGTCAAAGTAAGCGCATATGGGGTGAGCTCTACAAAGTGATAGACTCTTCTGATGTTGTTGTCCAGGTTTTAGATGCAAGGGACCCACAAGGTACTCGATGTTACCATCTAGAGAAGcatttaaaggaaaattacaAGCATAAACACATGATTCTTCTGCTAAACAAGTGTGATTTGGTCCCTGCTTGGGCGACAAAAGGATGGCTTAGAGTTTTGTCCAAAGAGTATCCAACTCTAGCATTCCATGCAAGCATTAACAAGTCCTTTGGAAAGGGTTCACTCCTTTCGGTGTTGAGACAATTTGCCCGATTGAAAAGTGACAAGCAAGCAATATCTGTGGGATTTGTTGGATATCCAAATGTCGGGAAGTCATCAGTGATCAACACATTACGAACAAAGAAtGTATGCAAGGTAGCTCCTATTCCAGGGGAGACTAAAGTTTGGCAGTATATAACTCTCACAAAGAGGATCTTCTTGATTGACTGCCCGGGTGTTGTTTATTACCAAAACAAAGACTCTGAAACAGATATCGTGCTAAAGGGTGTGGTACGTGTGACAAACTTGCAAGATGCTGCTGAACATATAGGTGAAGTTTTGAAACGTGTGAAGAAGGAGCACTTAGAAAGAGCATATAGGATTACAGCATGGGACGATGAGAATGACTTCCTAGTACAGCTTTGCAAGTCAAGTGGCAAACTCTTGAAGGGTGGTGAGCCTGACTTGATGACTGCTGCAAAGATGGTACTTCATGATTGGCAGAGGGGTAGAATACCCTTTTTTGTTCCTCCTCCTCGGCAGGATGACACATCTGAGGAAGTGGAACCCAATGTTAATGGTGTAGACATTGATGCTGGAGTTGACAGCAATCAGGCTTCTGCGGCTTTTAAAGCTATTGCGAATGTTCTTTCATCCCAGCAACAAAGAAGTGTACCTGTTCAAAGGGATTTATTTAATGAGATCGAGTTGAAGGATGATAATTCTGAGCAAAAGAACGAGGATGATAACGGTGAAGATGATCTGGCCACTGATAGCGACAGTGACGAATCTGAGCAGCAGATTCCAGCCACTGAGGTTCCATCTGAACAACCTCTTCCTTCCGAGAGTTTAAACGCGGAGCAGGTTCCAACTAGTGAATCGta 1730 0.4197 MTKKKEKKVNVSGKPKHSLDVNRSNDSNKGSRSAATVRRLKMYDTKPSRDRKGKILKNEFQSKELPNTRIQPDRRWFGNTRVVNQKQLEFFREELQNRMSNSNVVILNERKLPLSLLNDHQKQARVHLLDREPFGDAFGPKTKRKRPNLLAADYESLVKKADNSQEAFQQKYDASGSVEGKEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENYKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYYQNKDSETDIVLKGVVRVTNLQDAAEHIGEVLKRVKKEHLERAYRITAWDDENDFLVQLCKSSGKLLKGGEPDLMTAAKMVLHDWQRGRIPFFVPPPRQDDTSEEVEPNVNGVDIDAGVDSNQASAAFKAIANVLSSQQQRSVPVQRDLFNEIELKDDNSEQKNEDDNGEDDLATDSDSDESEQQIPATEVPSEQPLPSESLNAEQVPTSES 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00843 576 Pfam 50S ribosome-binding GTPase 310 376 IPR006073 GO:0005525
Bva09g00843 576 MobiDBLite consensus disorder prediction 544 576 - -
Bva09g00843 576 Pfam NGP1NT (NUC091) domain 42 167 IPR012971 -
Bva09g00843 576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 437 IPR027417 -
Bva09g00843 576 MobiDBLite consensus disorder prediction 528 543 - -
Bva09g00843 576 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Bva09g00843 576 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Bva09g00843 576 Gene3D - 365 458 IPR023179 -
Bva09g00843 576 MobiDBLite consensus disorder prediction 1 23 - -
Bva09g00843 576 MobiDBLite consensus disorder prediction 1 56 - -
Bva09g00843 576 MobiDBLite consensus disorder prediction 516 576 - -
Bva09g00843 576 Gene3D - 194 364 IPR027417 -
Bva09g00843 576 PANTHER GTP-BINDING PROTEIN-RELATED 3 551 - -
Bva09g00843 576 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 3 551 IPR024929 GO:0005730
Bva09g00843 576 CDD NGP_1 206 362 - -
Bva09g00843 576 MobiDBLite consensus disorder prediction 458 481 - -
Bva09g00843 576 MobiDBLite consensus disorder prediction 42 56 - -
Bva09g00843 576 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00843 Bva-Chr9 4363078 4367914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00843 K14537 - gmx:100781028 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00843 09 4363078 4367914 Bva09g00843 09 4363078 4367914 ECH