Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00842 ATGGATCGGGTGCTAAAAGCTGCGCGAGCCTCTGGTTCTCTCAACCTTTCGAATCGCTCGCTCAGGGAAGTGCCCAGCGAGGTCTACAGAAATCTCGATGGACTGGGGAGCGATGACAAGTGGTGGGAGGCTGTGGACCTCCTAAAGCTCATTTTGGCTCATAATGATATTGAGACAATAAAGGAAGATTTGAGAACTTTATCTTCATTGACTGTATTGAATGTCAGCCACAACAAACTCTCTGAGCTTCCGGCCGCCATAGGAGAGCTATCTCAGCTGAAGTTATTAGATGTGTCGTTCAATTCAATACATAAAATACCGGAAGAAATTGGTTCAGCAGCATCGCTTGTCAAGCTTGATTGTTCAAACAATAAGCTTAAGGAACTACCGAGCTCACTTGGGAGATGTTTGGAATTGTCCCAATTGAAGGGATCAAACAATCTTATTTCCAGCTTGCCAGAAGATCTTGCAAATTgttcaaaattgaccaaactAGATATGGAGggaaacaaaattacaatgaTATCTGAAAATCTCATTTCAGCATGGACCATGCTCACTGAATTCACTGCCTCTAAAAATTTGCTGAATGCCATACCTGCTAGCATTGGAGGTCTGTCCCGTCTAATTCGTCTTGATCTGCATCAGAACAGAATTTCAACCATCCCGTCATCAATCATGGGTTGCCACTCGCTTGCAGAGTTTTATATGGGGAATAACAACCTTATTGCCCTGCCAGCGGAGATAGGGGCCCTTTCTCGTCTAGGGACTTTAGATCTTCACTCTAACAAGTTGAAAGACTATCCAGCAGAGGCATGCGACTTGCATCTTTTAGTCTTGGATCTTTCAAATAATTCATTGAGTGGGTTACCCTCTGAAATGGGTAAGATGACGACCTTGAGGAAACTTCTGCTTTCGGGCAATCCTTTGCGAACTCTTCGAAGCTCTTTAGTCTCTGGACCTACACCAGCATTACTAAAATATCTCCAAAGTAGACTTTCCAAGAGTGAAGATTCTGAAGCTTCAACCACAAAAAAAGAGGATGTAATTACAATGGCTGCTCGATTATCTATCAGTTCAAAggAACTTTCTTTGAAAGGGCTGGGATTGAGCACTGTTCCATCAGAAGTCTGGGCAACGGACGAGGTCGTTAAACTTGATCTTTCTGGGAATTCCATCCAGGAGTTGCCCGTTGAACTTTCTTCTTGTGTTTTCCTCcagACGTTGATTTTATCCaggaataaaattgaagactGGCCAGGTTCAATTCTTAAGTCACTTTCGGGCCTTTTGTGTTTGAAGTTGGACAACAATCCCCTAAGAAAGATTCCTTCAGATGCTTTTGAAACTGTGCCTAAACTTCAGATTCTGGATCTATGTGGTAATGCAGCTTCACTACCAGATGATCCCGCATTTTCGAGGTTGCCATACCTGCAAGAGCTTTACTTGAGAAGAATGCGACTGAGTGAAGTCCCATCAGATATATTGAGGTTACAACAATTGCGTATCCTTGACTTGAGTCAAAATTCTCTTCAATCAGTACCAGAGgGATTCAAAGATCTTACTTCTCTAACAGAGCTCGACCTGTCTGATAATAATATCTCTGCGCTTCCCTCTGAGCTGggTTTGCTGGAATCAAGCCTTCAGGCGTTAAGACTTGAAGGGAATCCCCTCAGAAGcatTCGGAGGGCTGTCTTGGATAAAGGGACTAAGGCTGTTCTGAAATATTTGAAGGACAAATTGCCAGAGCAATA 1754 0.4173 MDRVLKAARASGSLNLSNRSLREVPSEVYRNLDGLGSDDKWWEAVDLLKLILAHNDIETIKEDLRTLSSLTVLNVSHNKLSELPAAIGELSQLKLLDVSFNSIHKIPEEIGSAASLVKLDCSNNKLKELPSSLGRCLELSQLKGSNNLISSLPEDLANCSKLTKLDMEGNKITMISENLISAWTMLTEFTASKNLLNAIPASIGGLSRLIRLDLHQNRISTIPSSIMGCHSLAEFYMGNNNLIALPAEIGALSRLGTLDLHSNKLKDYPAEACDLHLLVLDLSNNSLSGLPSEMGKMTTLRKLLLSGNPLRTLRSSLVSGPTPALLKYLQSRLSKSEDSEASTTKKEDVITMAARLSISSKELSLKGLGLSTVPSEVWATDEVVKLDLSGNSIQELPVELSSCVFLQTLILSRNKIEDWPGSILKSLSGLLCLKLDNNPLRKIPSDAFETVPKLQILDLCGNAASLPDDPAFSRLPYLQELYLRRMRLSEVPSDILRLQQLRILDLSQNSLQSVPEGFKDLTSLTELDLSDNNISALPSELGLLESSLQALRLEGNPLRSIRRAVLDKGTKAVLKYLKDKLPEQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00842 584 SMART LRR_typ_2 90 113 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 427 450 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 521 544 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 159 182 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 276 296 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 404 426 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 498 520 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 382 403 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 252 275 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 546 568 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 114 136 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 206 229 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 67 88 IPR003591 -
Bva09g00842 584 SMART LRR_typ_2 297 320 IPR003591 -
Bva09g00842 584 Pfam Leucine rich repeat 254 310 IPR001611 GO:0005515
Bva09g00842 584 Pfam Leucine rich repeat 406 462 IPR001611 GO:0005515
Bva09g00842 584 Pfam Leucine rich repeat 49 103 IPR001611 GO:0005515
Bva09g00842 584 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Bva09g00842 584 Pfam Leucine rich repeat 193 242 IPR001611 GO:0005515
Bva09g00842 584 Gene3D Ribonuclease Inhibitor 6 175 IPR032675 -
Bva09g00842 584 PANTHER LRR RECEPTOR-LIKE KINASE 136 584 - -
Bva09g00842 584 PANTHER LRR RECEPTOR-LIKE KINASE 14 134 - -
Bva09g00842 584 SUPERFAMILY L domain-like 41 317 - -
Bva09g00842 584 PRINTS Leucine-rich repeat signature 498 511 - -
Bva09g00842 584 PRINTS Leucine-rich repeat signature 277 290 - -
Bva09g00842 584 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Bva09g00842 584 ProSiteProfiles Leucine-rich repeat profile. 276 297 IPR001611 GO:0005515
Bva09g00842 584 Gene3D Ribonuclease Inhibitor 467 580 IPR032675 -
Bva09g00842 584 Gene3D Ribonuclease Inhibitor 176 271 IPR032675 -
Bva09g00842 584 Gene3D Ribonuclease Inhibitor 272 333 IPR032675 -
Bva09g00842 584 SUPERFAMILY L domain-like 360 559 - -
Bva09g00842 584 Gene3D Ribonuclease Inhibitor 334 466 IPR032675 -
Bva09g00842 584 SMART LRR_sd22_2 67 85 - -
Bva09g00842 584 SMART LRR_sd22_2 90 112 - -
Bva09g00842 584 SMART LRR_sd22_2 159 181 - -
Bva09g00842 584 SMART LRR_sd22_2 498 520 - -
Bva09g00842 584 SMART LRR_sd22_2 521 536 - -
Bva09g00842 584 SMART LRR_sd22_2 206 231 - -
Bva09g00842 584 ProSiteProfiles Leucine-rich repeat profile. 500 522 IPR001611 GO:0005515
Bva09g00842 584 SMART LRR_bac_2 274 293 - -
Bva09g00842 584 SMART LRR_bac_2 67 86 - -
Bva09g00842 584 SMART LRR_bac_2 521 540 - -
Bva09g00842 584 SMART LRR_bac_2 159 178 - -
Bva09g00842 584 SMART LRR_bac_2 113 132 - -
Bva09g00842 584 SMART LRR_bac_2 498 517 - -
Bva09g00842 584 SMART LRR_bac_2 90 109 - -
Bva09g00842 584 SMART LRR_bac_2 206 225 - -
Bva09g00842 584 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 136 584 - -
Bva09g00842 584 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 14 134 - -
Bva09g00842 584 ProSiteProfiles Leucine-rich repeat profile. 69 90 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00842 47 536 Receptor kinase-like Gene Family AT4G08850 28.080 8.63e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00842 - - gmx:100781571 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00842 09 4352062 4362422 Bva09g00842 09 4352062 4362422 ECH