Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00837 ATGGCTGACCGGTTCTTTCCCAACGAAATGCCAGAATTCGTTGAAGAGACGAGAGCCAAGGAATCTCTCTCTGAAGGAGCAAGAGACTCCCTCGCGAGcctcctttctcttccttacGAAACACTCTCCGAAAGATTCCAAAGAGCAGCCTTTGAATTGAAAGAATCGGTGGTGAGGGAGACGTGGGGGTTGAGTGGAAAGCGTGTGAAGGATTATACTCTGTACACGGGAGCCCTTGGAACAGCATACCTGGTTTTTAAAGCTTACCAAGTTACTAAAAATGGGAATGATCTTAGCTTGTGTACAGAGATTGTTAAGGCTTGTGATTCTGCTTCAAGAGATTCTGAGCGCGTGACATTCATATGTGGGCGGGCCGGTGTTCTTGCTCTTGGTGCTGCTATAGCAAAGCATAGTGGTGATGAAAAACTACTCAACTACTACTTAGGACAGTTCAAGGAGCTGATCAGACAGCCTCGTGATCTGCCCAATGAGCTATTGTATGGCAGAGCCGGTTACCTATGGGCTTGTTCATTCTTAAACAAGCATACTGGTAAAGATACAATATCTACTAGTCACATGaGATCAGTTGTGGATGAAGTTGTTAAGGCTGGTAGACAATTGGCCCGCAAGGGAAGATGTCCTCTTATGTATGAATGGCATGGGAAGAAATACTGGGGTGCTGCCCATGGACTAGCAGGGATTATGGGTGTTTTGATGGACATGGAATTGAAGCCAGATGAGGTGGAAGATGTCAAGGGTACTCTACATTACATGATTAAGAATCGTTTCCCTAGCGGGAACTATCCCTCAAGTGAAGGAAGTGAATCTGACCGTCTTGTGCATTGGTGTCATGGTGCCCCTGGAGTTGCACTTACCCTTGTAAAAGCAGCTGAGGTTTTTGGTAGTAAAGAATTTCTGCAAGCAGCTATTGACGCAGGTGAAGTGGTATGGAACAGGGGTCTGCTTAAGCGAGTTGGAATCTGTCATGGTATCAGCGGGAACACATATGTCTTCATTTCTCTCTACAGATTAACAGGTGACGTAAAGTACTTGTACAGGGCAAAAGCATTTGCTTGCTTTCTACTTGATAAAGGGCAAAGGCTGATCTTGGAAGGCAAGATGCATGGAGGAGATCGCCCTTACTCCTTGTTCGAAGGTCTTGGAGGAATGGCTTATATGTTTCTGGACATGGTCGACCTTAAGGAGGCAAAGTTTCCTGGATATGAATTTTA 1232 0.4481 MADRFFPNEMPEFVEETRAKESLSEGARDSLASLLSLPYETLSERFQRAAFELKESVVRETWGLSGKRVKDYTLYTGALGTAYLVFKAYQVTKNGNDLSLCTEIVKACDSASRDSERVTFICGRAGVLALGAAIAKHSGDEKLLNYYLGQFKELIRQPRDLPNELLYGRAGYLWACSFLNKHTGKDTISTSHMRSVVDEVVKAGRQLARKGRCPLMYEWHGKKYWGAAHGLAGIMGVLMDMELKPDEVEDVKGTLHYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVALTLVKAAEVFGSKEFLQAAIDAGEVVWNRGLLKRVGICHGISGNTYVFISLYRLTGDVKYLYRAKAFACFLLDKGQRLILEGKMHGGDRPYSLFEGLGGMAYMFLDMVDLKEAKFPGYEF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00837 410 PRINTS LanC-like protein superfamily signature 279 299 IPR007822 -
Bva09g00837 410 PRINTS LanC-like protein superfamily signature 163 178 IPR007822 -
Bva09g00837 410 PRINTS LanC-like protein superfamily signature 325 338 IPR007822 -
Bva09g00837 410 PRINTS LanC-like protein superfamily signature 224 240 IPR007822 -
Bva09g00837 410 PRINTS LanC-like protein superfamily signature 380 397 IPR007822 -
Bva09g00837 410 PRINTS LanC-like protein superfamily signature 71 89 IPR007822 -
Bva09g00837 410 SUPERFAMILY LanC-like 68 410 - -
Bva09g00837 410 PANTHER LANC-LIKE PROTEIN 1 409 - -
Bva09g00837 410 Gene3D - 1 410 IPR012341 GO:0005975
Bva09g00837 410 CDD euk_LANCL 74 406 - -
Bva09g00837 410 PANTHER LANC-LIKE PROTEIN GCL2 1 409 - -
Bva09g00837 410 PRINTS Eukaryotic LanC-like protein family signature 213 225 IPR020464 -
Bva09g00837 410 PRINTS Eukaryotic LanC-like protein family signature 296 317 IPR020464 -
Bva09g00837 410 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Bva09g00837 410 PRINTS Eukaryotic LanC-like protein family signature 259 274 IPR020464 -
Bva09g00837 410 PRINTS Eukaryotic LanC-like protein family signature 341 359 IPR020464 -
Bva09g00837 410 Pfam Lanthionine synthetase C-like protein 69 409 IPR007822 -
Bva09g00837 410 SMART LANC_like_2 68 410 IPR007822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00837 Bva-Chr9 4331182 4334014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00837 - - jre:109013436 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00837 09 4331182 4334014 Bva09g00837 09 4331182 4334014 ECH