Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00836 ATGGCTGCTGCTTTGGTCCCCGCTGCTTTCTCTATTCCTAAAGAGGGAAAGCCTAGTGTATCTCTCAAGGATTCGACCCTCTTTGGGGTTTCCTTGTCAGACCATCTCAAAGCTGACTTCAGCTCTTCTGCATTGAGGTGCAAGAGGGAATTCGGAGCTGTGAAGGCTCAGACGGTGGCTACTACAACACCAGCAGCTAACAGGGCTGCATCAGAAGGGAAGAAGACACTAAGAAAGGGCAGTGTTGTGATTACTGGTGCCTCCTCTGGGCTGGGTCTTGCCACTGCAAAGGCATTGGCAGAGACTGGAAAATGGCATGTAATTATGGCCTGCAGGGATTTCCTCAAAGCTGAAAGAGCTGCAAAATCTGCTGGCATTGCTAAGGAAAACTACACCATTATGCATTTAGACCTTGCTTCTCTTGACAGCGTTCGCCAATTCGTAGATAACTTCAGGCGATCAGGAAGGCCACTCGATGTGCTGGTTTGCAATGCTGCAGTTTACTTGCCAACTGCTAAGGAACCTACATTCACCGCTGAAGGCTTTGAGCTCAGTGTTGGCACTAACCATCTTGGACATTTTCTCCTTTCGCGCTTATTGCTTGAGGACTTGAACAAATCTGACTACCCATCAAAACGCCTGATCATCGTTGGATCTATAACAGGAAACACAAATACATTGGCTGGGAATGTGCCTCCCAAGGCCAACCTTGGTGACATGAGGGGACTTGCTGGAGGATTGAACGGGCTGAACAGTTCGGCTATGATTGATGGTGGGGATTTTGATGGTGCCAAGGCATACAAGGACAGCAAAGTCTGCAATATGCTCACCATGCAAGAGTTCCACAGAAGATACCATGAGGAAACTGGGGTCGCATTTGCTTCCCTTTACCCTGGTTGCATTGCTACAACAGGCTTGTTCAGAGAGCACATTCCCTTGTTCAGACTTCTCTTCCCACCTTTCCAGAAGTACATAACCAAAGGCTTCGTCTCAGAAGATGAATCAGGAAAGAGACTTGCTCAGgttGTAAGCGATCCAAGCTTGACGAAATCTGGTGTTTACTGGAGCTGGAACAAGGACTCAGCTTCATTTGAAAACCAGTTGTCCCAAGAGGCTAGCAATGCGGACAAGGCACGCAAGGTGTGGGAGATCAGTGAGAAACTTGTTGGTTTGGCCTA 1178 0.4813 MAAALVPAAFSIPKEGKPSVSLKDSTLFGVSLSDHLKADFSSSALRCKREFGAVKAQTVATTTPAANRAASEGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGIAKENYTIMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDMRGLAGGLNGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGVAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEDESGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASNADKARKVWEISEKLVGLA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00836 392 PANTHER - 3 391 IPR005979 GO:0016630
Bva09g00836 392 Gene3D - 66 392 - -
Bva09g00836 392 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 3 391 - -
Bva09g00836 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 77 360 IPR036291 -
Bva09g00836 392 PRINTS Glucose/ribitol dehydrogenase family signature 289 306 IPR002347 -
Bva09g00836 392 PRINTS Glucose/ribitol dehydrogenase family signature 81 98 IPR002347 -
Bva09g00836 392 PRINTS Glucose/ribitol dehydrogenase family signature 156 167 IPR002347 -
Bva09g00836 392 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 78 392 IPR005979 GO:0016630
Bva09g00836 392 CDD LPOR_like_SDR_c_like 79 391 - -
Bva09g00836 392 Pfam short chain dehydrogenase 82 224 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00836 Bva-Chr9 4329625 4332055 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00836 K00218 - csin:114285166 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00836 09 4329625 4332055 Bva09g00836 09 4329625 4332055 ECH