Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00830 ATGGAACAGGAGATGAAAGACTTAGAGTCTCAAAATGTTAAAGCATCAAGGGATGAAGAGACCCTTGACATCTTCAAGATGGCAAGTCGGCCTGTCACTCTCAAGTTTGTGGAAGTTGTGTACAAGATTAAGACCAAAACAGAAGGATTACTTGAGAAGAAAgtaaaaggagaagagaaagtgATATTAAAGGGGATAACAGGCATGGTTCAACCTGGTGAAATGCTAGCCATGCTAGGCCCATCTGGAAGTGGCAAAACAACTCTGTTAACAGCACTCGGCGGTCGGTTGCTTGGAGGGCGTCTGCAAGGAAGCATAACTTACAATGGCAAGACCTTCAACAATGCAATGAGGAGAAACACTGGCTTTGTTACTCAAGATGATGTTCTCTATCCCCACTTGACTGTGCTTGAAACTCTAGTGTTCACTGCCCTTTTGAGATTGTCCAACAGTTTcaccaaagaagagaaaattttgcatGCAGAAGCGGTGATAAAGCAACTTGGTTTAACCAAGTGCAAGAATAGCATCATTGGAGAGCCACTTGAGAGAGGGGTTTCTGGGGGAGAGAGGAAAAGGGTTAGCATCGGACAAGAAATGTTAATAAACCCAAGCTTATTGTTTTTGGATGAACCTACGTCTGGGCTTGACTCAACCACTGCCCAAAGgattttgtcaactttgaggGAGCTAGCAAATGGAGGGAGAACTATAGCGATGACCATACACCAGCCTTCAAGTAGGTTATATTACTTGTTCCATAAGGTAATGCTGCTATCTGAAGGGAATCCAGTGTACTTTGGAAAGGGATCCAAGGCTTTGGAATATTTTTCAAGTGTCGGATATGGCCCAACAATTACCATGAACCCTgcagattttcttttggatctTGCAAATGGTGCATACTCAGACGAATCAAGTGAAAATCAAGCCTTGGTTAAGCAGAAACTGGTTTCTGCTTACAAGAACAAGCTTGATGCTGAATTGAAGGCAGAGCTGAGCGAAATCAGTGACTGTGATCAAAACCAAGATGTGTTTCAAGATAACCACTTTGGGATGTGGCCAACAACTTGGATTCAGCAATTCTCCGTGTTGCTTAGAAGAGGGGTAAAAGAGAGGAAATATGAATCATTCTCTGGCCTCAGAATCAGTCAAGTCCTCTTGGTTGCTCTAATTTCAGGACTACTGTGGTATAAGTCTAACATTTCACACTTGCAGGATCAGATTGGGTTACTTTTCTTCATAATAGGCTTCTGGAGTTTCTATGCTCTTTTTGAagctattttcatctttccccaAGAGAGAATGATGCTTGAAAAAGAGAGATCCTCTGGCATGTACAGACTCTCATCATATTACATGTCAATGATAGTAACTGATATTCCAATGGTGCTTGTCCTCCCCACCATATTTCTCCTCATAACCTATTGGATGGCAGGGCTCAAGGGCAATGTGGTAAACTTcctctacacatggtttagcCTCTTATTCACTGTCTTAGTCTCACAAGGTCTAGGCCTTGCTATTGGCGCTATGGTGATGGATGAAAAATCTGCAACTACTCTTGCCTCAGTCGTAATGTTAACATTCCTTCTAGCTGCTGGGTATTATGTTCAAAATGTGCCAAAGTTTATATCTTGGGTGAAGTACATCTCTGCTGGCTACTACACATACCAGCTCATTATAGGGTCTCAGTATGATGCTACCGAGACTTACCCTTGTTCTGAAGGCCACTGTTTGGTTGCAGATTTTCCTGCTATAAAGATAATGGGAGTTCATGGGCAAGGGCTAGGTTTGCCTGTTTTGGCTCTAGGCTTAATGCTCATAGGGTATAGGCTTGTTGCTTATTTTGCTCTTATGAGGATTGGAGTGACAAAGAAATTGGCTTA 1889 0.3992 MEQEMKDLESQNVKASRDEETLDIFKMASRPVTLKFVEVVYKIKTKTEGLLEKKVKGEEKVILKGITGMVQPGEMLAMLGPSGSGKTTLLTALGGRLLGGRLQGSITYNGKTFNNAMRRNTGFVTQDDVLYPHLTVLETLVFTALLRLSNSFTKEEKILHAEAVIKQLGLTKCKNSIIGEPLERGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRILSTLRELANGGRTIAMTIHQPSSRLYYLFHKVMLLSEGNPVYFGKGSKALEYFSSVGYGPTITMNPADFLLDLANGAYSDESSENQALVKQKLVSAYKNKLDAELKAELSEISDCDQNQDVFQDNHFGMWPTTWIQQFSVLLRRGVKERKYESFSGLRISQVLLVALISGLLWYKSNISHLQDQIGLLFFIIGFWSFYALFEAIFIFPQERMMLEKERSSGMYRLSSYYMSMIVTDIPMVLVLPTIFLLITYWMAGLKGNVVNFLYTWFSLLFTVLVSQGLGLAIGAMVMDEKSATTLASVVMLTFLLAAGYYVQNVPKFISWVKYISAGYYTYQLIIGSQYDATETYPCSEGHCLVADFPAIKIMGVHGQGLGLPVLALGLMLIGYRLVAYFALMRIGVTKKLA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00830 629 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Bva09g00830 629 Gene3D - 51 280 IPR027417 -
Bva09g00830 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 19 623 - -
Bva09g00830 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 623 - -
Bva09g00830 629 Pfam ABC transporter 63 214 IPR003439 GO:0005524
Bva09g00830 629 SMART AAA_5 72 262 IPR003593 -
Bva09g00830 629 Pfam ABC-2 type transporter 360 565 IPR013525 GO:0016020|GO:0140359
Bva09g00830 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 278 IPR027417 -
Bva09g00830 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 286 IPR003439 GO:0005524
Bva09g00830 629 Pfam ABC-2 type transporter 243 311 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00830 Bva-Chr9 4289273 4291775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00830 62 247 Calmodulin-binding Proteins AT2G36910 27.604 6.74e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00830 K05681 - qsu:112022216 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00830 09 4289273 4291775 Bva09g00830 09 4289273 4291775 ECH