Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00825 ATGGCGTTCCCTTTGTCTTCCTCCATCATCTCTCACTCTCACAAGTTCTCCATCAATGTCTCCATTACTCCCTCTGCTTGGAACCAAACATTCTTTCCGACTCGTTCCATATCGTGCTTCAATGGGATCAGAGGCGAGGATCCAGCGAGAACAGGCTGCACCAGAATTatttccttgtcaaagaaAGATCTTCAAAAGGAACTGGTACGCGAGCATGGCTTCCCATTTTCATTGCCCATGTCAACTTTTAGTCAGACGATGAGACATATCAAGAGTCTGATTGCCATAATCATTGTCTCCGTCCATATTACCTTTTTTCCTATGCTTGGTTCAGATTCTTGGTCTATATTGCATGCTAGAGCAGTTCTGTACTCTCCAGACACAAAGGTTCCCAGAACCGGAGAAGTTGCTCTGAGGAGGGCTATCCCTGCAAACACAACCATGAAAACTATCCAGgacACTCTTGAAGATATCTCATACCTGTTAAGAATTCCACAAAGAAAACCTTATGGAACAATGGAGGGGAACGTGAAGAAAGCTTTGAAGATAGCGGTGGATGAAAAGGATTTAATATTGGCCAGTATACCAGCAGAACTGAGAGAAAAGGGTTCTTTGGTACATGCATCCCTAACAGATGGAAAGGGTGGATTACAATCTCTCCTTCAATCTATAAGGGATCAAGATGCAGACAAAGTATCTGTAAACCTTGCATCTACACTTGATACTGTAGCAGAGCTAGAGTTATTACAGGCACCGGGATTGTCTTTTCTATTGCCAGAGCAATTCTTGCAATACCCACGGCTTAAAGGTAGAGGAACTGTGGAGTTCACCATTGAGAAAGGAGATGGTTCAACTTTTTCTCGGATTGGTGgtgaagagagaaaaactGCAACTATTCagATTGTTTTAGATGGATACTCAGCGCCATTAACCGCAGGGAATTTTGCAAAACTGGTGATGGATGGAGCATATAATGGTGCAAAGCTCAGCTGCGTCAACCAAGCTGTTCTCTCAGATAATGGAGTTGATAAGAAGAGGGGTTACAGTGTTCCCTTAGAAATAATGCCCGCTGGACAATTTGAGCCCCTCTATAAAACAACGCTAAGCGTGCAGGATGGAGAATTGCCAGTTCTTCCTTTGTCAGTTTATGGGGCAGTTGCTATGGCACACAGTGAAGTCTCTGATGAGTACTCTTCACCTTATCAGTTTTTCTTCTATCTTTATGATAAACGCAGCgCTGGCTTGGGAGGGATATCATTTGATGAAGGGCAATTCTCAGTTTTTGGATATACAACCGTTGGAAGAGATATTCTCTCCCAGATAAAATCTGGTGACTTTGTTAGTTCTGCAAAGCTCGTTGAAGGCCAAGACCGCCTTGTGTTGCCAAAGGAAAGTTG 1397 0.423 MAFPLSSSIISHSHKFSINVSITPSAWNQTFFPTRSISCFNGIRGEDPARTGCTRIISLSKKDLQKELVREHGFPFSLPMSTFSQTMRHIKSLIAIIIVSVHITFFPMLGSDSWSILHARAVLYSPDTKVPRTGEVALRRAIPANTTMKTIQDTLEDISYLLRIPQRKPYGTMEGNVKKALKIAVDEKDLILASIPAELREKGSLVHASLTDGKGGLQSLLQSIRDQDADKVSVNLASTLDTVAELELLQAPGLSFLLPEQFLQYPRLKGRGTVEFTIEKGDGSTFSRIGGEERKTATIQIVLDGYSAPLTAGNFAKLVMDGAYNGAKLSCVNQAVLSDNGVDKKRGYSVPLEIMPAGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHSEVSDEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTVGRDILSQIKSGDFVSSAKLVEGQDRLVLPKES 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00825 465 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 298 445 IPR002130 GO:0000413|GO:0003755
Bva09g00825 465 Gene3D - 144 249 IPR023222 -
Bva09g00825 465 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 1 464 IPR044259 -
Bva09g00825 465 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 286 465 IPR002130 GO:0000413|GO:0003755
Bva09g00825 465 SUPERFAMILY Cyclophilin-like 298 449 IPR029000 -
Bva09g00825 465 Gene3D - 291 456 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00825 Bva-Chr9 4226743 4232209 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00825 - - qsu:112030709 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00825 09 4226743 4232209 Bva09g00825 09 4226743 4232209 ECH