Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00791 ATGGCTGCTTCTACTCTCTCCCACGCTACCCCTTGTAAGCTCCATTCGAgcaaaaatggaattttttccTCATCACAAGCTCTGTTGCCGAAACCCACTAGAACCCATTTGAGTAGAAGGGAAAAGAATCTGAGAATCACATGTCAGGCCACGAGTATACCAGCCGATGACCGTGTCCCCGACATGGGCAAGAGGCAGCTCATGAATCTCCTTCTGCTAGGTGCTATCTCTCTTCCCACTGCTGGCATGTTGATTCCTTATGCCACCTTCTTCGCCCCTCCTGGCTCAGGAGATGCTGGTGGTGGTATTGTAGCCAAGGACGCTCTTGGAAATGATGTCATTGCCGCTGAATGGCTCAAAACCCATGGCCCTGGTGACAGAACCTTGACTCAaggtttgaagGGAGACCCAACCTATCTTGTTGTGCAGAATGATAGAACTCTGGCAACATATGGCATCAATGCAGTGTGCACACATTTGGGTTGCGTGGTGCCGTGGAATGCTGCTCAAAACAAGTTCATCTGTCCATGCCATGGTTCTCAATACAACAACCAAGGCAGGGTTGTCAGAGGCCCTGCTCCTTTGTCGTTGGCGCTGGCACATGCAGATGTGGAAGATGGCAAAGTAGTGTTTGTACCTTGGGTTGAAACTGATTTCAGAACAAGCGATGCTCCGTGGTGGTCTTG 686 0.4854 MAASTLSHATPCKLHSSKNGIFSSSQALLPKPTRTHLSRREKNLRITCQATSIPADDRVPDMGKRQLMNLLLLGAISLPTAGMLIPYATFFAPPGSGDAGGGIVAKDALGNDVIAAEWLKTHGPGDRTLTQGLKGDPTYLVVQNDRTLATYGINAVCTHLGCVVPWNAAQNKFICPCHGSQYNNQGRVVRGPAPLSLALAHADVEDGKVVFVPWVETDFRTSDAPWWS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00791 228 SUPERFAMILY ISP domain 57 227 IPR036922 GO:0051537
Bva09g00791 228 Pfam Rieske [2Fe-2S] domain 135 197 IPR017941 GO:0051537
Bva09g00791 228 Gene3D - 94 228 IPR036922 GO:0051537
Bva09g00791 228 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 115 211 IPR017941 GO:0051537
Bva09g00791 228 PRINTS Rieske 2Fe-2S subunit signature 173 185 IPR005805 GO:0016020|GO:0051537
Bva09g00791 228 PRINTS Rieske 2Fe-2S subunit signature 185 197 IPR005805 GO:0016020|GO:0051537
Bva09g00791 228 PRINTS Rieske 2Fe-2S subunit signature 152 163 IPR005805 GO:0016020|GO:0051537
Bva09g00791 228 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 224 IPR014349 GO:0051537
Bva09g00791 228 PANTHER CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT 1 224 - -
Bva09g00791 228 Gene3D Single helix bin 50 93 - -
Bva09g00791 228 Hamap Cytochrome b6-f complex iron-sulfur subunit [petC]. 51 228 IPR023960 GO:0016020|GO:0045158|GO:0051537
Bva09g00791 228 CDD Rieske_cytochrome_b6f 103 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00791 Bva-Chr9 4074751 4076189 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00791 K02636 - zju:107430257 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00791 09 4074751 4076189 Bva09g00791 09 4074751 4076189 ECH