Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00785 ATGGAACTCGATTATGGTTTGGATTTTCAGGACTACTTTCCTTCCATGATTGCGTGTATGGGCGCGGAGGGCTTCATGAGGGAGCTCATCAACGGGTTTCGCTTGCTGATGGACGTGAACAAGGGTTTAATCACGTTCGAGAGCTTGAAGATGAACTGCTTCTTGCTTGGAGTGGAGGACATGAGGGACGAGGAGATTGTGTTCATGTTGATGGAAGGTGATCTGGATGGAGATGGTGCTTTGAGCCAAATGGAGTTCTGCATTCTCATGTTTAGGTTGAGTCCTGGTTTGATGATGGATCAAGGGCCTACGAATATCAATGGAGGATACTATGGACGTTA 341 0.4692 MELDYGLDFQDYFPSMIACMGAEGFMRELINGFRLLMDVNKGLITFESLKMNCFLLGVEDMRDEEIVFMLMEGDLDGDGALSQMEFCILMFRLSPGLMMDQGPTNINGGYYGR 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00785 113 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Bva09g00785 113 PANTHER CALCIUM-BINDING PROTEIN KIC 4 100 IPR044205 GO:0005509
Bva09g00785 113 Pfam EF-hand domain pair 41 92 IPR002048 GO:0005509
Bva09g00785 113 Gene3D - 7 106 - -
Bva09g00785 113 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 4 100 - -
Bva09g00785 113 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
Bva09g00785 113 SUPERFAMILY EF-hand 6 90 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00785 Bva-Chr9 4044833 4045737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00785 9 98 EF-hand Containing Proteins AT5G54490 57.143 7.07e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00785 K24345 - gmx:100794479 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00785 09 4044833 4045737 Bva09g00785 09 4044833 4045737 ECH