Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00771 atgagtattattattattgctgTCTTCCTCAGAAGCCAACCCTTGGCCAGGACAGGATCGATAAGCAGAGCTGATTTTCCACGAGGGTTCATCTTTGGAACTGCTTCTTCAGCTTACCAATTTGAGGGAGCTGTTCATGAAGGAAATAAAGGAGAGACCACATGGGATACCTTCTCACGTCTACCAGGTAGAGGGAGAATTTTGGACTTTAGTAATGCAGACATCGCTGTTGATCAATATCATCGGTTTAAGCAGAATGCTATAGACTTGATGAAGGATCTGGGGATGGATGCTTTCAGATTTTCCATATCATGGTCAAGAATTTTCCCCAATGGAACAGGAAAGCCCAATTCAGAgggaataaattattacagCAGCCTCATAAATGCTTTACTGGAAAAAGGAATCCAGCCTTTTGTAACCCTATATCAGTGGGATCTTCCACAGATGCTTGAAGATAAATATGAAGGATGGTTAAGCACACAAATAGTAGAAGATTTTGAACGTTATGCCTATACTTGCTTCCAAGCTTTTGGAGACACAGTGAAGCACTGGATTACCTTCAATGAACCTCATAACTTGGCACTCCACGGTTATGATTTAGGCATTCAAGCTCCTGGAAGATGCTCCATTTTGGGTCATTTCCTGTGCAAGAAGGGAaaatcatccactggaccatATATTGTTGCTCATAACGTTCTCTTATCTCATGCTGCTTCTTATCACAGTTACCAGCTGCATTTCAAGAAAAGGCAAGGAGGTCAAATTGGAATAGCACTAGATGCCTTATGGTATGAGCCAATGACTGAATTTGATGAGGACAAAGATGCTGCTGCAAGAGCTATGGATTTTTCAGTTGGATGGTTCCTTGACCCTCTTTTAACTGGAAAGTATCCTGCttcaatgaaagaaatagTGGCTGAAAGACTACCAGAGATTTCTGATGCAATTAGGAGTTCTCTGGTGGGATCCCTGGATTTTGTTGGCCTGAATCACTATACTTCAGTATATGCTCGAAACGATAGGACTCAGATCAGTAAACTGATTTTCCAGGATGCTGCATCTGATGCTGCTGTGATTACAACTTGTAAGCTATCATCATTATGTAAATTGCGAAGTGCAGCTTCACGTTGGCTCAACATTGTTCCATGGGGAATCAGAATGTTGGCTAGATATGTGAAACACAAGTATGGGAATCCAGCAGTGATTATAACAGAAAATGAAGATGCCTTGCAAGATGACAAGAGGATAAGATTCCATAGAGATTATCTTTCAAATCTATCGGCTGCTATAAGGGAAGATGATTGCAATGTGCAGGGTTACTTTGTGTGGTCATTGCTTGACAACTGGGAGTGGAACACGGGCTATAGTGTCCGTTTTGGACTCTACTATGTGGATTTTAAGAATAACCTTACCAGGATACCAAAAGCTTCTGTTCAATGGTTCAAAAACATGCTCAGATTAAAAGCTGAAATCACCAATTggatcta 1490 0.3919 MSIIIIAVFLRSQPLARTGSISRADFPRGFIFGTASSAYQFEGAVHEGNKGETTWDTFSRLPGRGRILDFSNADIAVDQYHRFKQNAIDLMKDLGMDAFRFSISWSRIFPNGTGKPNSEGINYYSSLINALLEKGIQPFVTLYQWDLPQMLEDKYEGWLSTQIVEDFERYAYTCFQAFGDTVKHWITFNEPHNLALHGYDLGIQAPGRCSILGHFLCKKGKSSTGPYIVAHNVLLSHAASYHSYQLHFKKRQGGQIGIALDALWYEPMTEFDEDKDAAARAMDFSVGWFLDPLLTGKYPASMKEIVAERLPEISDAIRSSLVGSLDFVGLNHYTSVYARNDRTQISKLIFQDAASDAAVITTCKLSSLCKLRSAASRWLNIVPWGIRMLARYVKHKYGNPAVIITENEDALQDDKRIRFHRDYLSNLSAAIREDDCNVQGYFVWSLLDNWEWNTGYSVRFGLYYVDFKNNLTRIPKASVQWFKNMLRLKAEITNWI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00771 496 Gene3D Glycosidases 14 487 - -
Bva09g00771 496 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 30 44 IPR033132 -
Bva09g00771 496 SUPERFAMILY (Trans)glycosidases 17 485 IPR017853 -
Bva09g00771 496 PANTHER GLYCOSYL HYDROLASE 16 487 IPR001360 GO:0004553|GO:0005975
Bva09g00771 496 Pfam Glycosyl hydrolase family 1 24 488 IPR001360 GO:0004553|GO:0005975
Bva09g00771 496 PANTHER BETA-GLUCOSIDASE 41-RELATED 16 487 - -
Bva09g00771 496 PRINTS Glycosyl hydrolase family 1 signature 324 338 IPR001360 GO:0004553|GO:0005975
Bva09g00771 496 PRINTS Glycosyl hydrolase family 1 signature 435 452 IPR001360 GO:0004553|GO:0005975
Bva09g00771 496 PRINTS Glycosyl hydrolase family 1 signature 413 424 IPR001360 GO:0004553|GO:0005975
Bva09g00771 496 PRINTS Glycosyl hydrolase family 1 signature 459 471 IPR001360 GO:0004553|GO:0005975
Bva09g00771 496 PRINTS Glycosyl hydrolase family 1 signature 402 410 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00771 Bva-Chr9 3925939 3928695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00771 20 432 Glycoside Hydrolase AT5G54570 68.471 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00771 K01188 - gmx:100783543 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00771 09 3925939 3928695 Bva09g00771 09 3925939 3928695 ECH