Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00753 ATGGGGAAGTATGAGCCCAAGTATCCTTTGGGGTGTGAACCAGTGGTGGGTTCGTTAACATCGTCGAAGAAGAAGGAATACAAGGTTACCAATCGCCTTCAAGAGGGCAAGCGCCCAATATACGCTATTACGTTCAACTTCATTGACTCCAATTACTTGAACGTTTTCGCCACTGCTGGTGGCAACCGGGTTACTGTTTATCAATGCCTTGAAGGAGGAATCATTGCTCTGTTGCAATCTTACATAGATGAAGATGTAAGTGAAGGCTCTAAGGAGGAATCCTTTTACACGGTGAGCTGGGCATCCGGCACTGATGGGACCCCATTTGTTGTTGCTGGAGGATGCAATGGCATAATTCGAATCATTGATATTGGCACAGAGAAGATACATAAGAGTTTTATTGGCCATGGGGACTCTATAAATGAAGTCAGGACTCAACCTCTGAGGCCATCCCTTATAGTGTCTGCAAGCAAAGATGAGTCTGTCCGGTTATGGAATGTTCATACGGGAATATGTGTTTTGATATTTGCTGGAGCTGGGGGTCACCGTAATGAAGTTTTGAGTGTGGACTTTCATCCATCAGATATGTATCGAATTGCCAGTTGTGGGATGGATAATACTGTCAAGCTATGGTCTATGAAGGAGTTCTGGCCCTATGTAGAGAAATCATTCACATGGACAGATCTCCCTTCTAAGTTTCCAACAAAACATGTTCAATTTCCTGTGTTTATTGCTTCTGTTCATACAAATTATGTTGACTGTAATAGGTGGCTTGGTGATTTTATCCTATCAAAGAGTGTTGACAATGAAATTGTGTTGTGGGAACCTAAATTGAAGGAACAAATTCCAGGGGAGGGTACAGCTGACGTTCTTCAGAAATACCCTGTTCCTGAGAGCGATATCTGGTTCATCAAGTTTTCATGTGATTTCAGTTACAATGCAGTTGCAATAGGGAACAGGGAAGGTAAGATATTCGTTTGGGAAGTGCAGTCTAGTCCTCCTGTTCTTATCGCAAGGTTAACCCATGCTCAATCAAAAGCACCAATCAGACAGACTGCTTTATCCTATGATGGAAGCACCATTTTGTGTTCCTGTGAGGATGGGACAATATGGCGCTGGGATGCTGTCACAACTTCTTA 1139 0.4311 MGKYEPKYPLGCEPVVGSLTSSKKKEYKVTNRLQEGKRPIYAITFNFIDSNYLNVFATAGGNRVTVYQCLEGGIIALLQSYIDEDKEESFYTVSWASGTDGTPFVVAGGCNGIIRIIDIGTEKIHKSFIGHGDSINEVRTQPLRPSLIVSASKDESVRLWNVHTGICVLIFAGAGGHRNEVLSVDFHPSDMYRIASCGMDNTVKLWSMKEFWPYVEKSFTWTDLPSKFPTKHVQFPVFIASVHTNYVDCNRWLGDFILSKSVDNEIVLWEPKLKEQIPGEGTADVLQKYPVPESDIWFIKFSCDFSYNAVAIGNREGKIFVWEVQSSPPVLIARLTHAQSKAPIRQTALSYDGSTILCSCEDGTIWRWDAVTTS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00753 374 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 174 209 - -
Bva09g00753 374 Gene3D - 20 372 IPR015943 GO:0005515
Bva09g00753 374 SMART WD40_4 26 68 IPR001680 GO:0005515
Bva09g00753 374 SMART WD40_4 328 369 IPR001680 GO:0005515
Bva09g00753 374 SMART WD40_4 233 270 IPR001680 GO:0005515
Bva09g00753 374 SMART WD40_4 74 118 IPR001680 GO:0005515
Bva09g00753 374 SMART WD40_4 164 207 IPR001680 GO:0005515
Bva09g00753 374 SMART WD40_4 121 161 IPR001680 GO:0005515
Bva09g00753 374 SMART WD40_4 282 323 IPR001680 GO:0005515
Bva09g00753 374 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 128 165 - -
Bva09g00753 374 ProSiteProfiles Trp-Asp (WD) repeats profile. 174 209 IPR001680 GO:0005515
Bva09g00753 374 PANTHER POLYCOMB PROTEIN 6 373 - -
Bva09g00753 374 PRINTS G protein beta WD-40 repeat signature 257 271 IPR020472 -
Bva09g00753 374 PRINTS G protein beta WD-40 repeat signature 148 162 IPR020472 -
Bva09g00753 374 PRINTS G protein beta WD-40 repeat signature 194 208 IPR020472 -
Bva09g00753 374 SUPERFAMILY WD40 repeat-like 26 369 IPR036322 GO:0005515
Bva09g00753 374 Pfam WD domain, G-beta repeat 126 161 IPR001680 GO:0005515
Bva09g00753 374 Pfam WD domain, G-beta repeat 175 207 IPR001680 GO:0005515
Bva09g00753 374 ProSitePatterns Trp-Asp (WD) repeats signature. 148 162 IPR019775 -
Bva09g00753 374 ProSiteProfiles Trp-Asp (WD) repeats profile. 128 170 IPR001680 GO:0005515
Bva09g00753 374 PANTHER POLYCOMB GROUP PROTEIN FIE1 6 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00753 Bva-Chr9 3834959 3839526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00753 104 211 Miscellaneous Gene Families AT5G08390 28.704 4.63e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00753 K11462 - jre:108983540 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00753 09 3834959 3839526 Bva09g00753 09 3834959 3839526 ECH