Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00742 ATGTGGAGAGATAGTGGAGCTCCTGCTGATTCTTTCTATGAAACCCGCCCAGAGTGCACCGATGTCCCCAATAGTCGTTTTAGAATCAGGGCTGGTAAAACACTTAGTGTGAGAAAATGGCAGGCAGCATTTACTCCAGAAGGACAGCTGGATATAGGCAAGACTTTAGGCCGAATCCACCGAGGGGGAGTCCATCCATCAATTAGAGGGGAGGTTTGGGAATTTTTACTTGGTTGCTATGAGCCACAGAGTAcatatgaagaaagagagcagATAAGACAGTACAGAAGGTTGGAATATACTAAATGGAAGGAAGTATGCCGCGAATTGTTTCCTCTTGTTGGAAGTGGTAGATTTATTACAGCACCTGTAATCACTGAAGATGGACGGCCAATTCAAGATCCGTTGGTGCTTTTACAGATGAATCCAGAAAAGGGAGCGATTGCACCTCCTCAAGATAATAAAGGGGGTCGTCCACCCTCGAATGATTTAGAAAGGGTGACAGACAAGAGAATAATTCAGTGGATGCTAACTTTACATCAAATAgGTCTTGATGTGGTTCGCACTGATAGGACACTGATTTTTTATGAGAAGCAAGAGAACTTGTCAAAATTATGGGATATTCTTGCCGTTTATGCTTGGGTTGATAAAGATGTTGGCTATTGCCAAGGAATGAGTGACCTTTGCTCCCCAATGATAATGCTTCTCGAGGATGAAGGAGATGCCTTTTGGTGCTTTGAACGTCTGATGCGCAGATTGCGAGGGAATTTCAGATGCACTGATAGCTCTGTTGGAGTGGAGACACAGCTGAGtaatttggcttcgattactCAAGTCATTGATCCAAAACTTCATCAGCATATAGAGCATCTAGGTGGAGGTGACTATCTGTTTGCTTTTCGGATGCTTATGGTTCTATTTCGTCgagaattttccttttgtgatTCCTTGTACCTCTGGGAGATGATGTGGGCTCTAGAATACGATCCCGACTTGTTCTTTATGTATGAAGAGGCTGACTCACTTTCTGAAAAAGCTGATGcaaaaggaaaaccaaaatcatCACGTCAATGTGGCAAGTATGAGAGAGAATACATGAGAAATGGAGCAAAGACTGAAGCTCCTCTCCCTATATCAGTTTTCCTTGTTGCCAGTgtgttgaaagaaaagagcGCAATATTATTAGCAGAAGCCAAAGGCCTTGACGATGTTGTCAAGATATTGAATGACAATGCTGGAAATCTGGATGCCAAAAAAGCTTGTACCAATGCGCTGAAATTACACAAGAAATACTTGAAAAAGgCGAAGCAGGCATA 1316 0.3997 MWRDSGAPADSFYETRPECTDVPNSRFRIRAGKTLSVRKWQAAFTPEGQLDIGKTLGRIHRGGVHPSIRGEVWEFLLGCYEPQSTYEEREQIRQYRRLEYTKWKEVCRELFPLVGSGRFITAPVITEDGRPIQDPLVLLQMNPEKGAIAPPQDNKGGRPPSNDLERVTDKRIIQWMLTLHQIGLDVVRTDRTLIFYEKQENLSKLWDILAVYAWVDKDVGYCQGMSDLCSPMIMLLEDEGDAFWCFERLMRRLRGNFRCTDSSVGVETQLSNLASITQVIDPKLHQHIEHLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFFMYEEADSLSEKADAKGKPKSSRQCGKYEREYMRNGAKTEAPLPISVFLVASVLKEKSAILLAEAKGLDDVVKILNDNAGNLDAKKACTNALKLHKKYLKKAKQA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00742 438 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 1 438 - -
Bva09g00742 438 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 265 431 IPR035969 -
Bva09g00742 438 ProSiteProfiles TBC/rab GAP domain profile. 63 327 IPR000195 -
Bva09g00742 438 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 1 438 - -
Bva09g00742 438 SMART tbc_4 60 350 IPR000195 -
Bva09g00742 438 Gene3D - 263 438 - -
Bva09g00742 438 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 164 257 - -
Bva09g00742 438 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 40 287 IPR035969 -
Bva09g00742 438 Pfam Rab-GTPase-TBC domain 171 326 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00742 Bva-Chr9 3792703 3797509 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00742 - - qsu:111989415 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00742 09 3792703 3797509 Bva09g00742 09 3792703 3797509 ECH